Human (GRCh38.p14)
Description

cold inducible RNA binding protein [Source:HGNC Symbol;Acc:HGNC:1982]

Gene Synonyms

CIRP

Location
About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 4349 variant alleles and maps to 1031 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000587896.6CIRBP-2143346297aaENSP00000466025.1
 
Protein coding
CCDS74245D6W5Y5 NM_001300829.2MANE SelectEnsembl CanonicalGENCODE basicTSL:2
ENST00000589710.5CIRBP-2251835297aaENSP00000466897.1
 
Protein coding
CCDS74245D6W5Y5 -GENCODE basicTSL:2
ENST00000586548.5CIRBP-2081734159aaENSP00000466712.1
 
Protein coding
K7EMY9 -TSL:3
ENST00000413636.6CIRBP-2021606263aaENSP00000412831.2
 
Protein coding
Q14011-2 -GENCODE basicTSL:2
ENST00000588030.5CIRBP-2151509172aaENSP00000468788.1
 
Protein coding
CCDS12059Q14011-1 -GENCODE basicAPPRIS P3TSL:5
ENST00000588090.5CIRBP-2161459172aaENSP00000466207.1
 
Protein coding
CCDS12059Q14011-1 -GENCODE basicAPPRIS P3TSL:3
ENST00000320936.9CIRBP-2011328172aaENSP00000322887.4
 
Protein coding
CCDS12059Q14011-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000586472.5CIRBP-2071303172aaENSP00000465779.1
 
Protein coding
CCDS12059Q14011-1 -GENCODE basicAPPRIS P3TSL:3
ENST00000587323.5CIRBP-2131092297aaENSP00000465077.1
 
Protein coding
CCDS74245D6W5Y5 -GENCODE basicTSL:5
ENST00000589235.5CIRBP-2221073168aaENSP00000467848.1
 
Protein coding
CCDS74244K7EPM4 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000628979.2CIRBP-2461043297aaENSP00000486590.1
 
Protein coding
CCDS74245D6W5Y5 -GENCODE basicTSL:2
ENST00000588230.5CIRBP-2171013297aaENSP00000465558.1
 
Protein coding
CCDS74245D6W5Y5 -GENCODE basicTSL:5
ENST00000586773.5CIRBP-211942168aaENSP00000468645.1
 
Protein coding
CCDS74244K7EPM4 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000585630.5CIRBP-204870172aaENSP00000466110.1
 
Protein coding
CCDS12059Q14011-1 -GENCODE basicAPPRIS P3TSL:3
ENST00000591935.5CIRBP-235746168aaENSP00000467734.1
 
Protein coding
CCDS74244K7EPM4 -GENCODE basicAPPRIS ALT1TSL:3
ENST00000588411.5CIRBP-219619105aaENSP00000465338.1
 
Protein coding
K7EJV5 -TSL:5CDS 3' incomplete
ENST00000589266.5CIRBP-22361680aaENSP00000467138.2
 
Protein coding
K7ENX8 -TSL:3CDS 3' incomplete
ENST00000591659.5CIRBP-234587173aaENSP00000468097.1
 
Protein coding
K7ER40 -TSL:2CDS 3' incomplete
ENST00000592051.1CIRBP-23657332aaENSP00000468016.1
 
Protein coding
K7EQX4 -TSL:4CDS 3' incomplete
ENST00000589686.5CIRBP-224532148aaENSP00000465334.2
 
Protein coding
K7EJV1 -TSL:2CDS 3' incomplete
ENST00000588344.2CIRBP-21837089aaENSP00000466238.2
 
Protein coding
K7ELV6 -TSL:3CDS 5' incomplete
ENST00000592815.5CIRBP-24033438aaENSP00000467028.2
 
Protein coding
K7ENN6 -TSL:4CDS 3' incomplete
ENST00000590347.5CIRBP-2283117135aaENSP00000467307.1
 
Nonsense mediated decay
K7ELT6 -TSL:2
ENST00000587169.5CIRBP-212302879aaENSP00000465114.1
 
Nonsense mediated decay
K7EQL0 -TSL:2
ENST00000591097.5CIRBP-231150760aaENSP00000468229.1
 
Nonsense mediated decay
K7EIF7 -TSL:1
ENST00000585914.5CIRBP-2061052202aaENSP00000467948.1
 
Nonsense mediated decay
K7EQR7 -TSL:5
ENST00000586636.5CIRBP-210938168aaENSP00000464906.1
 
Nonsense mediated decay
CCDS74244K7EPM4 -TSL:2
ENST00000591055.5CIRBP-230928135aaENSP00000466216.1
 
Nonsense mediated decay
K7ELT6 -TSL:2
ENST00000590171.1CIRBP-22690560aaENSP00000464728.1
 
Nonsense mediated decay
K7EIF7 -TSL:3
ENST00000585913.5CIRBP-205833168aaENSP00000467449.1
 
Nonsense mediated decay
CCDS74244K7EPM4 -TSL:3
ENST00000591376.5CIRBP-23283079aaENSP00000464830.1
 
Nonsense mediated decay
K7EQL0 -TSL:3
ENST00000593048.5CIRBP-24165079aaENSP00000467791.1
 
Nonsense mediated decay
K7EQL0 -TSL:3
ENST00000444172.6CIRBP-20358458aaENSP00000407512.3
 
Nonsense mediated decay
F6WMK9 -TSL:3CDS 5' incomplete
ENST00000592234.5CIRBP-23757173aaENSP00000466131.2
 
Nonsense mediated decay
K7ELL4 -TSL:5CDS 5' incomplete
ENST00000592412.5CIRBP-23853279aaENSP00000467876.1
 
Nonsense mediated decay
K7EQL0 -TSL:4
ENST00000590188.5CIRBP-227361No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000593093.5CIRBP-2423528No protein-
 
Retained intron
--TSL:2
ENST00000590704.5CIRBP-2291456No protein-
 
Retained intron
--TSL:2
ENST00000588917.2CIRBP-2201087No protein-
 
Retained intron
--TSL:2
ENST00000621399.1CIRBP-2451044No protein-
 
Retained intron
--TSL:1
ENST00000592467.1CIRBP-239796No protein-
 
Retained intron
--TSL:2
ENST00000593128.5CIRBP-243796No protein-
 
Retained intron
--TSL:3
ENST00000589161.1CIRBP-221769No protein-
 
Retained intron
--TSL:3
ENST00000593283.5CIRBP-244758No protein-
 
Retained intron
--TSL:5
ENST00000586555.2CIRBP-209716No protein-
 
Retained intron
--TSL:2
ENST00000591622.1CIRBP-233548No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 6, Coding exons: 5, Transcript length: 3,346 bps, Translation length: 297 residues

MANE

This MANE Select transcript contains ENSP00000466025 and matches to NM_001300829.2 and NP_001287758.1

CCDS

This transcript is a member of the Human CCDS set: CCDS74245

Transcript Support Level (TSL)

TSL:2

Version

ENST00000587896.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

retained intron final [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.