Human (GRCh38.p14)
Description

SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]

Gene Synonyms

MGC13261, MGC5373, SEC22L3

Location
About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 22227 variant alleles and maps to 343 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000264454.8SEC22C-2016340303aaENSP00000264454.3
 
Protein coding
CCDS2700Q9BRL7-1 NM_032970.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000451653.5SEC22C-2115955225aaENSP00000415969.1
 
Protein coding
H7C479 -TSL:1CDS 5' incomplete
ENST00000273156.11SEC22C-2021608250aaENSP00000273156.7
 
Protein coding
CCDS2699Q9BRL7-2 -GENCODE basicTSL:1
ENST00000417572.5SEC22C-2051513250aaENSP00000407564.1
 
Protein coding
CCDS2699Q9BRL7-2 -GENCODE basicTSL:3
ENST00000423701.6SEC22C-2071458228aaENSP00000414576.2
 
Protein coding
CCDS56246Q9BRL7-3 -GENCODE basicTSL:1
ENST00000456515.5SEC22C-214872236aaENSP00000391170.1
 
Protein coding
C9J448 -TSL:3CDS 3' incomplete
ENST00000450981.5SEC22C-210721142aaENSP00000397170.1
 
Protein coding
C9J2R1 -TSL:3CDS 3' incomplete
ENST00000420163.1SEC22C-20655375aaENSP00000408242.1
 
Protein coding
C9JNW1 -TSL:4CDS 3' incomplete
ENST00000416880.5SEC22C-204527107aaENSP00000391957.1
 
Protein coding
C9J9A4 -TSL:4CDS 3' incomplete
ENST00000449617.5SEC22C-2091446143aaENSP00000389589.1
 
Nonsense mediated decay
F8WDR5 -TSL:2
ENST00000445388.5SEC22C-20882372aaENSP00000404987.1
 
Nonsense mediated decay
F8VQT7 -TSL:5
ENST00000454141.5SEC22C-21278061aaENSP00000411725.1
 
Nonsense mediated decay
F8WBN1 -TSL:3
ENST00000383750.8SEC22C-20375272aaENSP00000373256.4
 
Nonsense mediated decay
F8VQT7 -TSL:3
ENST00000493107.5SEC22C-216827No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000456222.1SEC22C-213558No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000487701.1SEC22C-215729No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,513 bps, Translation length: 250 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BRL7

CCDS

This transcript is a member of the Human CCDS set: CCDS2699

Transcript Support Level (TSL)

TSL:3

Version

ENST00000417572.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.