Human (GRCh38.p14)
Description

calpain 3 [Source:HGNC Symbol;Acc:HGNC:1480]

Gene Synonyms

CANP3, LGMD2, LGMD2A, NCL-1, P94

Location
About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 4091 variant alleles and maps to 437 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000397163.8CAPN3-2053315821aaENSP00000380349.3
 
Protein coding
CCDS45245P20807-1 NM_000070.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000674139.1CAPN3-2554597156aaENSP00000501054.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673750.1CAPN3-2284195191aaENSP00000501173.1
 
Protein coding
H3BS77 -GENCODE basic
ENST00000318023.11CAPN3-2013172773aaENSP00000326281.8
 
Protein coding
F8W8F5 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000357568.8CAPN3-2043130815aaENSP00000350181.3
 
Protein coding
CCDS32207P20807-3 -GENCODE basicTSL:1
ENST00000349748.8CAPN3-2033045729aaENSP00000183936.4
 
Protein coding
CCDS10085P20807-2 -GENCODE basicTSL:1
ENST00000674052.1CAPN3-2492354229aaENSP00000501057.1
 
Protein coding
A0A669KB08 -GENCODE basic
ENST00000673886.1CAPN3-2352078156aaENSP00000501155.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674093.1CAPN3-2511984156aaENSP00000501303.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674146.1CAPN3-2571733156aaENSP00000501175.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674149.1CAPN3-2581707156aaENSP00000501112.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674018.1CAPN3-2461691156aaENSP00000501271.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673851.1CAPN3-2331688156aaENSP00000501142.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000397200.8CAPN3-2061643309aaENSP00000380384.4
 
Protein coding
CCDS45246P20807-4 -GENCODE basicTSL:1
ENST00000673978.1CAPN3-2421623202aaENSP00000500976.1
 
Protein coding
A0A669KAB9 -GENCODE basic
ENST00000673743.1CAPN3-2271526122aaENSP00000500989.1
 
Protein coding
A0A669KAX6 -GENCODE basic
ENST00000673928.1CAPN3-2381437156aaENSP00000501099.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673771.1CAPN3-2291418156aaENSP00000501023.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673890.1CAPN3-2361416156aaENSP00000501293.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673936.1CAPN3-2391317156aaENSP00000501189.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000337571.9CAPN3-2021304156aaENSP00000336840.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:1
ENST00000397204.9CAPN3-2071263156aaENSP00000380387.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:1
ENST00000674119.1CAPN3-2521170156aaENSP00000501217.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000569136.6CAPN3-2181148156aaENSP00000455254.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:2
ENST00000561817.5CAPN3-209915191aaENSP00000456575.1
 
Protein coding
H3BS77 -GENCODE basicTSL:1
ENST00000569827.5CAPN3-219908255aaENSP00000454379.1
 
Protein coding
H3BMH1 -TSL:5CDS 3' incomplete
ENST00000673839.1CAPN3-232897144aaENSP00000501188.1
 
Protein coding
A0A669KB98 -CDS 3' incomplete
ENST00000673692.1CAPN3-225861156aaENSP00000501138.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674135.1CAPN3-254801201aaENSP00000501178.1
 
Protein coding
A0A669KBA3 -CDS 3' incomplete
ENST00000674041.1CAPN3-248725184aaENSP00000500956.1
 
Protein coding
A0A669KAU6 -CDS 3' incomplete
ENST00000565559.5CAPN3-214711157aaENSP00000457878.1
 
Protein coding
H3BUZ3 -TSL:3CDS 3' incomplete
ENST00000564503.5CAPN3-211593169aaENSP00000457898.1
 
Protein coding
H3BV08 -TSL:5CDS 5' incomplete
ENST00000567071.5CAPN3-215563188aaENSP00000456607.1
 
Protein coding
H3BSA2 -TSL:4CDS 5' and 3' incomplete
ENST00000673705.1CAPN3-226223984aaENSP00000501021.1
 
Nonsense mediated decay
A0A669KB02 -CDS 5' incomplete
ENST00000673987.1CAPN3-243135099aaENSP00000501231.1
 
Nonsense mediated decay
A0A669KBE1 --
ENST00000674011.1CAPN3-244134899aaENSP00000501171.1
 
Nonsense mediated decay
A0A669KBE1 --
ENST00000673939.1CAPN3-240128899aaENSP00000501129.1
 
Nonsense mediated decay
A0A669KBE1 --
ENST00000673646.1CAPN3-221102783aaENSP00000501007.1
 
Nonsense mediated decay
A0A0S2Z3E6 --
ENST00000568153.2CAPN3-217769110aaENSP00000454937.2
 
Nonsense mediated decay
H3BNN7 -TSL:5CDS 5' incomplete
ENST00000565274.5CAPN3-213734110aaENSP00000457759.1
 
Nonsense mediated decay
H3BUR3 -TSL:5CDS 5' incomplete
ENST00000567817.6CAPN3-21671884aaENSP00000456514.2
 
Nonsense mediated decay
H3BS30 -TSL:5CDS 5' incomplete
ENST00000562199.2CAPN3-210469109aaENSP00000501034.1
 
Nonsense mediated decay
A0A669KB11 -TSL:5CDS 5' incomplete
ENST00000673893.1CAPN3-23741143aaENSP00000500987.1
 
Nonsense mediated decay
A0A669KAU4 -CDS 5' incomplete
ENST00000638141.2CAPN3-2202745No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000674140.1CAPN3-2561577No protein-
 
Protein coding CDS not defined
---
ENST00000673658.1CAPN3-2221166No protein-
 
Protein coding CDS not defined
---
ENST00000673950.1CAPN3-241913No protein-
 
Protein coding CDS not defined
---
ENST00000565173.2CAPN3-212879No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000674012.1CAPN3-245796No protein-
 
Protein coding CDS not defined
---
ENST00000674064.1CAPN3-250794No protein-
 
Protein coding CDS not defined
---
ENST00000673854.1CAPN3-2346433No protein-
 
Retained intron
---
ENST00000673774.1CAPN3-2301724No protein-
 
Retained intron
---
ENST00000466222.7CAPN3-2081366No protein-
 
Retained intron
--TSL:2
ENST00000673813.1CAPN3-2311102No protein-
 
Retained intron
---
ENST00000673687.1CAPN3-2241071No protein-
 
Retained intron
---
ENST00000674027.1CAPN3-247799No protein-
 
Retained intron
---
ENST00000674130.1CAPN3-253705No protein-
 
Retained intron
---
ENST00000673684.1CAPN3-223521No protein-
 
Retained intron
---
Statistics

Exons: 11, Coding exons: 7, Transcript length: 1,437 bps, Translation length: 156 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P20807

CCDS

This transcript is a member of the Human CCDS set: CCDS10086

Version

ENST00000673928.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.