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EnsemblEnsembl Home
Description

phosphatidylinositol glycan anchor biosynthesis class C [Source:HGNC Symbol;Acc:HGNC:8960]

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000344529.5PIGC-2011456297aaENSP00000356701.3
 
Protein coding
CCDS1302Q92535 NM_153747.2MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000367728.1PIGC-2022630297aaENSP00000356702.1
 
Protein coding
CCDS1302Q92535 -GENCODE basicAPPRIS P1TSL:NA
ENST00000484368.1PIGC-2061661No protein-
 
Processed transcript
---TSL:1
ENST00000478184.1PIGC-205744No protein-
 
Processed transcript
---TSL:3
ENST00000465374.1PIGC-203547No protein-
 
Processed transcript
---TSL:3
ENST00000489002.5PIGC-207465No protein-
 
Processed transcript
---TSL:5
ENST00000475059.5PIGC-204411No protein-
 
Processed transcript
---TSL:5
Description

growth arrest specific 5 [Source:HGNC Symbol;Acc:HGNC:16355]

Gene Synonyms

NCRNA00030, SNHG2

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000650796.1GAS5-2303145No protein-
 
Retained intron
---
ENST00000693469.1GAS5-2771886No protein-
 
Retained intron
---
ENST00000431268.5GAS5-2101698No protein-
 
Retained intron
--TSL:2
ENST00000442067.6GAS5-2151695No protein-
 
Retained intron
--TSL:2
ENST00000693030.1GAS5-2731364No protein-
 
Retained intron
---
ENST00000444470.6GAS5-2171326No protein-
 
Retained intron
--TSL:2
ENST00000687409.1GAS5-2461194No protein-
 
Retained intron
---
ENST00000692671.1GAS5-2711176No protein-
 
Retained intron
---
ENST00000455838.6GAS5-2261158No protein-
 
Retained intron
--TSL:2
ENST00000688895.1GAS5-2531150No protein-
 
Retained intron
---
ENST00000421068.5GAS5-2041060No protein-
 
Retained intron
--TSL:2
ENST00000416952.6GAS5-2031017No protein-
 
Retained intron
--TSL:2
ENST00000412059.6GAS5-201985No protein-
 
Retained intron
--TSL:5
ENST00000458220.2GAS5-229955No protein-
 
Retained intron
--TSL:2
ENST00000422008.6GAS5-205945No protein-
 
Retained intron
--TSL:3
ENST00000443799.5GAS5-216897No protein-
 
Retained intron
--TSL:5
ENST00000449589.6GAS5-220827No protein-
 
Retained intron
--TSL:3
ENST00000436656.6GAS5-214825No protein-
 
Retained intron
--TSL:3
ENST00000436285.6GAS5-213805No protein-
 
Retained intron
--TSL:2
ENST00000689469.1GAS5-256788No protein-
 
Retained intron
---
ENST00000422183.6GAS5-206778No protein-
 
Retained intron
--TSL:2
ENST00000456812.7GAS5-228753No protein-
 
Retained intron
--TSL:3
ENST00000422207.5GAS5-207643No protein-
 
Retained intron
--TSL:2
ENST00000454813.1GAS5-225621No protein-
 
Retained intron
--TSL:3
ENST00000456293.5GAS5-227583No protein-
 
Retained intron
--TSL:3
ENST00000434796.5GAS5-212575No protein-
 
Retained intron
--TSL:2
ENST00000651080.1GAS5-2311071No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000685107.1GAS5-2351509No protein-
 
lncRNA
--GENCODE basic
ENST00000691712.1GAS5-2691466No protein-
 
lncRNA
--GENCODE basic
ENST00000690941.1GAS5-2651443No protein-
 
lncRNA
--GENCODE basic
ENST00000689895.1GAS5-2581271No protein-
 
lncRNA
--GENCODE basic
ENST00000688557.1GAS5-2511184No protein-
 
lncRNA
--GENCODE basic
ENST00000691056.1GAS5-2661169No protein-
 
lncRNA
--GENCODE basic
ENST00000451607.5GAS5-2221007No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000693450.1GAS5-2751003No protein-
 
lncRNA
--GENCODE basic
ENST00000685008.1GAS5-233990No protein-
 
lncRNA
--GENCODE basic
ENST00000432536.5GAS5-211959No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000685159.1GAS5-236916No protein-
 
lncRNA
--GENCODE basic
ENST00000687063.1GAS5-244821No protein-
 
lncRNA
--GENCODE basic
ENST00000687710.1GAS5-249817No protein-
 
lncRNA
--GENCODE basic
ENST00000689860.1GAS5-257774No protein-
 
lncRNA
--GENCODE basic
ENST00000686918.1GAS5-241763No protein-
 
lncRNA
--GENCODE basic
ENST00000687189.1GAS5-245731No protein-
 
lncRNA
--GENCODE basic
ENST00000430245.5GAS5-209723No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000685758.1GAS5-237692No protein-
 
lncRNA
--GENCODE basic
ENST00000454068.5GAS5-224688No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000690172.1GAS5-260657No protein-
 
lncRNA
--GENCODE basic
ENST00000685039.1GAS5-234652No protein-
 
lncRNA
--GENCODE basic
ENST00000691213.1GAS5-268650No protein-
 
lncRNA
--GENCODE basic
ENST00000688573.1GAS5-252633No protein-
 
lncRNA
--GENCODE basic
ENST00000450589.6GAS5-221631No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000693521.1GAS5-278630No protein-
 
lncRNA
--GENCODE basic
ENST00000689958.1GAS5-259619No protein-
 
lncRNA
--GENCODE basic
ENST00000693348.1GAS5-274619No protein-
 
lncRNA
--GENCODE basic
ENST00000686460.1GAS5-239613No protein-
 
lncRNA
--GENCODE basic
ENST00000691137.1GAS5-267612No protein-
 
lncRNA
--GENCODE basic
ENST00000689238.1GAS5-255607No protein-
 
lncRNA
--GENCODE basic
ENST00000690761.1GAS5-264605No protein-
 
lncRNA
--GENCODE basic
ENST00000448718.6GAS5-218592No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000690448.1GAS5-263583No protein-
 
lncRNA
--GENCODE basic
ENST00000686995.1GAS5-242580No protein-
 
lncRNA
--GENCODE basic
ENST00000688952.1GAS5-254580No protein-
 
lncRNA
--GENCODE basic
ENST00000687022.1GAS5-243566No protein-
 
lncRNA
--GENCODE basic
ENST00000686878.1GAS5-240566No protein-
 
lncRNA
--GENCODE basic
ENST00000692994.1GAS5-272564No protein-
 
lncRNA
--GENCODE basic
ENST00000690228.1GAS5-261563No protein-
 
lncRNA
--GENCODE basic
ENST00000687987.1GAS5-250554No protein-
 
lncRNA
--GENCODE basic
ENST00000449289.6GAS5-219543No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000687549.1GAS5-248539No protein-
 
lncRNA
--GENCODE basic
ENST00000690349.1GAS5-262527No protein-
 
lncRNA
--GENCODE basic
ENST00000414075.6GAS5-202519No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000691982.1GAS5-270518No protein-
 
lncRNA
--GENCODE basic
ENST00000684949.1GAS5-232518No protein-
 
lncRNA
--GENCODE basic
ENST00000687435.1GAS5-247500No protein-
 
lncRNA
--GENCODE basic
ENST00000452197.5GAS5-223483No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000693459.1GAS5-276479No protein-
 
lncRNA
--GENCODE basic
ENST00000686231.1GAS5-238465No protein-
 
lncRNA
--GENCODE basic
ENST00000425771.6GAS5-208426No protein-
 
lncRNA
--GENCODE basicTSL:3
Description

zinc finger C2HC-type containing 1C [Source:HGNC Symbol;Acc:HGNC:20354]

Gene Synonyms

C14orf140, FAM164C

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000524913.3ZC2HC1C-2033923456aaENSP00000435550.1
 
Protein coding
CCDS41972Q53FD0-1 NM_024643.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:2
ENST00000674017.1ZC2HC1C-2124322275aaENSP00000501062.1
 
Protein coding
CCDS45138Q53FD0-2 -GENCODE basic
ENST00000674097.1ZC2HC1C-2153178275aaENSP00000501052.1
 
Protein coding
CCDS45138Q53FD0-2 -GENCODE basic
ENST00000674086.1ZC2HC1C-2133082456aaENSP00000501056.1
 
Protein coding
CCDS41972Q53FD0-1 -GENCODE basicAPPRIS P1
ENST00000238686.8ZC2HC1C-2012249389aaENSP00000238686.8
 
Protein coding
CCDS81829J3KMY6 -GENCODE basicTSL:5
ENST00000554763.2ZC2HC1C-2091746275aaENSP00000451195.2
 
Protein coding
CCDS45138Q53FD0-2 -GENCODE basicTSL:3
ENST00000525046.2ZC2HC1C-2041697275aaENSP00000435684.2
 
Protein coding
CCDS45138Q53FD0-2 -GENCODE basicTSL:4
ENST00000526130.2ZC2HC1C-2051551275aaENSP00000437160.2
 
Protein coding
CCDS45138Q53FD0-2 -GENCODE basicTSL:2
ENST00000439583.2ZC2HC1C-2021509275aaENSP00000390606.2
 
Protein coding
CCDS45138Q53FD0-2 -GENCODE basicTSL:1
ENST00000674094.1ZC2HC1C-2142627423aaENSP00000501069.1
 
Protein coding
-A0A669KB15 -GENCODE basic
ENST00000532198.2ZC2HC1C-2071606290aaENSP00000434733.2
 
Protein coding
-H0YE08 -GENCODE basicTSL:3
ENST00000534151.1ZC2HC1C-20856493aaENSP00000434997.1
 
Protein coding
-E9PMG6 -TSL:4CDS 3' incomplete
ENST00000673981.1ZC2HC1C-2113611275aaENSP00000501014.1
 
Nonsense mediated decay
CCDS45138Q53FD0-2 --
ENST00000673663.1ZC2HC1C-210884No protein-
 
Processed transcript
----
ENST00000526748.2ZC2HC1C-206637No protein-
 
Processed transcript
---TSL:3
Description

nicalin [Source:MGI Symbol;Acc:MGI:1926081]

Gene Synonyms

3100002P13Rik

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000020463.14Ncln-2013118563aaENSMUSP00000020463.8
 
Protein coding
CCDS36000Q8VCM8 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000118498.8Ncln-2022841562aaENSMUSP00000112744.2
 
Protein coding
-D3YU17 GENCODE basicTSL:5
ENSMUST00000124437.2Ncln-20345164aaENSMUSP00000115235.2
 
Protein coding
-F6S731 TSL:5CDS 5' incomplete
ENSMUST00000151701.8Ncln-208844No protein-
 
Retained intron
--TSL:2
ENSMUST00000125521.8Ncln-204694No protein-
 
Retained intron
--TSL:2
ENSMUST00000130400.2Ncln-205690No protein-
 
Retained intron
--TSL:3
ENSMUST00000136721.2Ncln-206655No protein-
 
Retained intron
--TSL:2
ENSMUST00000151680.2Ncln-207480No protein-
 
Retained intron
--TSL:2
ENSMUST00000153205.2Ncln-209428No protein-
 
Retained intron
--TSL:3
Description

calpain 3 [Source:HGNC Symbol;Acc:HGNC:1480]

Gene Synonyms

CANP3, LGMD2, LGMD2A, nCL-1, p94

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000397163.8CAPN3-2063315821aaENSP00000380349.3
 
Protein coding
CCDS45245P20807-1 NM_000070.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000674139.1CAPN3-2564597156aaENSP00000501054.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000357568.8CAPN3-2053130815aaENSP00000350181.3
 
Protein coding
CCDS32207P20807-3 -GENCODE basicTSL:1
ENST00000349748.8CAPN3-2033045729aaENSP00000183936.4
 
Protein coding
CCDS10085P20807-2 -GENCODE basicTSL:1
ENST00000673886.1CAPN3-2362078156aaENSP00000501155.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674093.1CAPN3-2521984156aaENSP00000501303.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674146.1CAPN3-2581733156aaENSP00000501175.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674149.1CAPN3-2591707156aaENSP00000501112.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674018.1CAPN3-2471691156aaENSP00000501271.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673851.1CAPN3-2341688156aaENSP00000501142.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000397200.8CAPN3-2071643309aaENSP00000380384.4
 
Protein coding
CCDS45246P20807-4 -GENCODE basicTSL:1
ENST00000673928.1CAPN3-2391437156aaENSP00000501099.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673771.1CAPN3-2301418156aaENSP00000501023.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673890.1CAPN3-2371416156aaENSP00000501293.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673936.1CAPN3-2401317156aaENSP00000501189.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000337571.9CAPN3-2021304156aaENSP00000336840.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:1
ENST00000356316.7CAPN3-2041291156aaENSP00000348667.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:5
ENST00000397204.9CAPN3-2081263156aaENSP00000380387.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:1
ENST00000674119.1CAPN3-2531170156aaENSP00000501217.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000569136.6CAPN3-2191148156aaENSP00000455254.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:2
ENST00000673692.1CAPN3-226861156aaENSP00000501138.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673750.1CAPN3-2294195191aaENSP00000501173.1
 
Protein coding
-H3BS77 -GENCODE basic
ENST00000318023.11CAPN3-2013172773aaENSP00000326281.8
 
Protein coding
-F8W8F5 -GENCODE basicTSL:5
ENST00000674052.1CAPN3-2502354229aaENSP00000501057.1
 
Protein coding
-A0A669KB08 -GENCODE basic
ENST00000673978.1CAPN3-2431623202aaENSP00000500976.1
 
Protein coding
-A0A669KAB9 -GENCODE basic
ENST00000673743.1CAPN3-2281526122aaENSP00000500989.1
 
Protein coding
-A0A669KAX6 -GENCODE basic
ENST00000561817.5CAPN3-210915191aaENSP00000456575.1
 
Protein coding
-H3BS77 -GENCODE basicTSL:1
ENST00000569827.5CAPN3-220908255aaENSP00000454379.1
 
Protein coding
-H3BMH1 -TSL:5CDS 3' incomplete
ENST00000673839.1CAPN3-233897144aaENSP00000501188.1
 
Protein coding
-A0A669KB98 -CDS 3' incomplete
ENST00000674135.1CAPN3-255801201aaENSP00000501178.1
 
Protein coding
-A0A669KBA3 -CDS 3' incomplete
ENST00000674041.1CAPN3-249725184aaENSP00000500956.1
 
Protein coding
-A0A669KAU6 -CDS 3' incomplete
ENST00000565559.5CAPN3-215711157aaENSP00000457878.1
 
Protein coding
-H3BUZ3 -TSL:3CDS 3' incomplete
ENST00000564503.5CAPN3-212593169aaENSP00000457898.1
 
Protein coding
-H3BV08 -TSL:5CDS 5' incomplete
ENST00000567071.5CAPN3-216563188aaENSP00000456607.1
 
Protein coding
-H3BSA2 -TSL:4CDS 5' and 3' incomplete
ENST00000673705.1CAPN3-227223984aaENSP00000501021.1
 
Nonsense mediated decay
-A0A669KB02 -CDS 5' incomplete
ENST00000673987.1CAPN3-244135099aaENSP00000501231.1
 
Nonsense mediated decay
-A0A669KBE1 --
ENST00000674011.1CAPN3-245134899aaENSP00000501171.1
 
Nonsense mediated decay
-A0A669KBE1 --
ENST00000673939.1CAPN3-241128899aaENSP00000501129.1
 
Nonsense mediated decay
-A0A669KBE1 --
ENST00000673646.1CAPN3-222102783aaENSP00000501007.1
 
Nonsense mediated decay
-A0A0S2Z3E6 --
ENST00000568153.2CAPN3-218769110aaENSP00000454937.2
 
Nonsense mediated decay
-H3BNN7 -TSL:5CDS 5' incomplete
ENST00000565274.5CAPN3-214734110aaENSP00000457759.1
 
Nonsense mediated decay
-H3BUR3 -TSL:5CDS 5' incomplete
ENST00000567817.6CAPN3-21771884aaENSP00000456514.2
 
Nonsense mediated decay
-H3BS30 -TSL:5CDS 5' incomplete
ENST00000562199.2CAPN3-211469109aaENSP00000501034.1
 
Nonsense mediated decay
-A0A669KB11 -TSL:5CDS 5' incomplete
ENST00000673893.1CAPN3-23841143aaENSP00000500987.1
 
Nonsense mediated decay
-A0A669KAU4 -CDS 5' incomplete
ENST00000638141.2CAPN3-2212745No protein-
 
Processed transcript
---TSL:5
ENST00000674140.1CAPN3-2571577No protein-
 
Processed transcript
----
ENST00000673658.1CAPN3-2231166No protein-
 
Processed transcript
----
ENST00000673950.1CAPN3-242913No protein-
 
Processed transcript
----
ENST00000565173.2CAPN3-213879No protein-
 
Processed transcript
---TSL:4
ENST00000674012.1CAPN3-246796No protein-
 
Processed transcript
----
ENST00000674064.1CAPN3-251794No protein-
 
Processed transcript
----
ENST00000673854.1CAPN3-2356433No protein-
 
Retained intron
----
ENST00000673774.1CAPN3-2311724No protein-
 
Retained intron
----
ENST00000466222.7CAPN3-2091366No protein-
 
Retained intron
---TSL:2
ENST00000673813.1CAPN3-2321102No protein-
 
Retained intron
----
ENST00000673687.1CAPN3-2251071No protein-
 
Retained intron
----
ENST00000674027.1CAPN3-248799No protein-
 
Retained intron
----
ENST00000674130.1CAPN3-254705No protein-
 
Retained intron
----
ENST00000673684.1CAPN3-224521No protein-
 
Retained intron
----
Statistics

Exons: 9, Coding exons: 5, Transcript length: 1,288 bps, Translation length: 99 residues

Version

ENST00000673939.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x336f4528)