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Description

stromal antigen 1 [Source:MGI Symbol;Acc:MGI:1098658]

Gene Synonyms

SA-1, Scc3

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000129269.8Stag1-20661861258aaENSMUSP00000116205.2
 
Protein coding
CCDS23441Q9D3E6 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000041418.13Stag1-20159091221aaENSMUSP00000040724.7
 
Protein coding
-F8WHU7 GENCODE basicTSL:5
ENSMUST00000146934.8Stag1-2142885869aaENSMUSP00000120974.2
 
Protein coding
-F6XQW1 TSL:5CDS 5' incomplete
ENSMUST00000146312.8Stag1-2131012196aaENSMUSP00000116597.2
 
Protein coding
-Q8C918 TSL:1CDS 3' incomplete
ENSMUST00000143955.2Stag1-211853285aaENSMUSP00000115460.2
 
Protein coding
-F6TNY1 TSL:5CDS 5' and 3' incomplete
ENSMUST00000133388.2Stag1-207583144aaENSMUSP00000119637.2
 
Protein coding
-D3Z1T1 TSL:3CDS 3' incomplete
ENSMUST00000124487.8Stag1-20553650aaENSMUSP00000123595.2
 
Protein coding
-D3YYD4 TSL:5CDS 3' incomplete
ENSMUST00000123302.8Stag1-2034800424aaENSMUSP00000117879.2
 
Nonsense mediated decay
-D6REF2 TSL:1
ENSMUST00000138405.8Stag1-2082637306aaENSMUSP00000116322.2
 
Nonsense mediated decay
-D6RHQ7 TSL:1
ENSMUST00000155108.8Stag1-2161793174aaENSMUSP00000118952.2
 
Nonsense mediated decay
-D6RH50 TSL:1
ENSMUST00000149771.8Stag1-2153857No protein-
 
Processed transcript
--TSL:5
ENSMUST00000191345.2Stag1-2173607No protein-
 
Retained intron
--TSL:NA
ENSMUST00000143816.8Stag1-2102022No protein-
 
Retained intron
--TSL:1
ENSMUST00000143150.2Stag1-209692No protein-
 
Retained intron
--TSL:3
ENSMUST00000122824.2Stag1-202596No protein-
 
Retained intron
--TSL:5
ENSMUST00000123315.8Stag1-204588No protein-
 
Retained intron
--TSL:3
ENSMUST00000144005.8Stag1-212558No protein-
 
Retained intron
--TSL:2
Description

calpain 3 [Source:HGNC Symbol;Acc:HGNC:1480]

Gene Synonyms

CANP3, LGMD2, LGMD2A, nCL-1, p94

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000397163.8CAPN3-2063315821aaENSP00000380349.3
 
Protein coding
CCDS45245P20807-1 NM_000070.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000674139.1CAPN3-2564597156aaENSP00000501054.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000357568.8CAPN3-2053130815aaENSP00000350181.3
 
Protein coding
CCDS32207P20807-3 -GENCODE basicTSL:1
ENST00000349748.8CAPN3-2033045729aaENSP00000183936.4
 
Protein coding
CCDS10085P20807-2 -GENCODE basicTSL:1
ENST00000673886.1CAPN3-2362078156aaENSP00000501155.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674093.1CAPN3-2521984156aaENSP00000501303.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674146.1CAPN3-2581733156aaENSP00000501175.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674149.1CAPN3-2591707156aaENSP00000501112.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000674018.1CAPN3-2471691156aaENSP00000501271.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673851.1CAPN3-2341688156aaENSP00000501142.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000397200.8CAPN3-2071643309aaENSP00000380384.4
 
Protein coding
CCDS45246P20807-4 -GENCODE basicTSL:1
ENST00000673928.1CAPN3-2391437156aaENSP00000501099.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673771.1CAPN3-2301418156aaENSP00000501023.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673890.1CAPN3-2371416156aaENSP00000501293.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673936.1CAPN3-2401317156aaENSP00000501189.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000337571.9CAPN3-2021304156aaENSP00000336840.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:1
ENST00000356316.7CAPN3-2041291156aaENSP00000348667.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:5
ENST00000397204.9CAPN3-2081263156aaENSP00000380387.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:1
ENST00000674119.1CAPN3-2531170156aaENSP00000501217.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000569136.6CAPN3-2191148156aaENSP00000455254.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:2
ENST00000673692.1CAPN3-226861156aaENSP00000501138.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
ENST00000673750.1CAPN3-2294195191aaENSP00000501173.1
 
Protein coding
-H3BS77 -GENCODE basic
ENST00000318023.11CAPN3-2013172773aaENSP00000326281.8
 
Protein coding
-F8W8F5 -GENCODE basicTSL:5
ENST00000674052.1CAPN3-2502354229aaENSP00000501057.1
 
Protein coding
-A0A669KB08 -GENCODE basic
ENST00000673978.1CAPN3-2431623202aaENSP00000500976.1
 
Protein coding
-A0A669KAB9 -GENCODE basic
ENST00000673743.1CAPN3-2281526122aaENSP00000500989.1
 
Protein coding
-A0A669KAX6 -GENCODE basic
ENST00000561817.5CAPN3-210915191aaENSP00000456575.1
 
Protein coding
-H3BS77 -GENCODE basicTSL:1
ENST00000569827.5CAPN3-220908255aaENSP00000454379.1
 
Protein coding
-H3BMH1 -TSL:5CDS 3' incomplete
ENST00000673839.1CAPN3-233897144aaENSP00000501188.1
 
Protein coding
-A0A669KB98 -CDS 3' incomplete
ENST00000674135.1CAPN3-255801201aaENSP00000501178.1
 
Protein coding
-A0A669KBA3 -CDS 3' incomplete
ENST00000674041.1CAPN3-249725184aaENSP00000500956.1
 
Protein coding
-A0A669KAU6 -CDS 3' incomplete
ENST00000565559.5CAPN3-215711157aaENSP00000457878.1
 
Protein coding
-H3BUZ3 -TSL:3CDS 3' incomplete
ENST00000564503.5CAPN3-212593169aaENSP00000457898.1
 
Protein coding
-H3BV08 -TSL:5CDS 5' incomplete
ENST00000567071.5CAPN3-216563188aaENSP00000456607.1
 
Protein coding
-H3BSA2 -TSL:4CDS 5' and 3' incomplete
ENST00000673705.1CAPN3-227223984aaENSP00000501021.1
 
Nonsense mediated decay
-A0A669KB02 -CDS 5' incomplete
ENST00000673987.1CAPN3-244135099aaENSP00000501231.1
 
Nonsense mediated decay
-A0A669KBE1 --
ENST00000674011.1CAPN3-245134899aaENSP00000501171.1
 
Nonsense mediated decay
-A0A669KBE1 --
ENST00000673939.1CAPN3-241128899aaENSP00000501129.1
 
Nonsense mediated decay
-A0A669KBE1 --
ENST00000673646.1CAPN3-222102783aaENSP00000501007.1
 
Nonsense mediated decay
-A0A0S2Z3E6 --
ENST00000568153.2CAPN3-218769110aaENSP00000454937.2
 
Nonsense mediated decay
-H3BNN7 -TSL:5CDS 5' incomplete
ENST00000565274.5CAPN3-214734110aaENSP00000457759.1
 
Nonsense mediated decay
-H3BUR3 -TSL:5CDS 5' incomplete
ENST00000567817.6CAPN3-21771884aaENSP00000456514.2
 
Nonsense mediated decay
-H3BS30 -TSL:5CDS 5' incomplete
ENST00000562199.2CAPN3-211469109aaENSP00000501034.1
 
Nonsense mediated decay
-A0A669KB11 -TSL:5CDS 5' incomplete
ENST00000673893.1CAPN3-23841143aaENSP00000500987.1
 
Nonsense mediated decay
-A0A669KAU4 -CDS 5' incomplete
ENST00000638141.2CAPN3-2212745No protein-
 
Processed transcript
---TSL:5
ENST00000674140.1CAPN3-2571577No protein-
 
Processed transcript
----
ENST00000673658.1CAPN3-2231166No protein-
 
Processed transcript
----
ENST00000673950.1CAPN3-242913No protein-
 
Processed transcript
----
ENST00000565173.2CAPN3-213879No protein-
 
Processed transcript
---TSL:4
ENST00000674012.1CAPN3-246796No protein-
 
Processed transcript
----
ENST00000674064.1CAPN3-251794No protein-
 
Processed transcript
----
ENST00000673854.1CAPN3-2356433No protein-
 
Retained intron
----
ENST00000673774.1CAPN3-2311724No protein-
 
Retained intron
----
ENST00000466222.7CAPN3-2091366No protein-
 
Retained intron
---TSL:2
ENST00000673813.1CAPN3-2321102No protein-
 
Retained intron
----
ENST00000673687.1CAPN3-2251071No protein-
 
Retained intron
----
ENST00000674027.1CAPN3-248799No protein-
 
Retained intron
----
ENST00000674130.1CAPN3-254705No protein-
 
Retained intron
----
ENST00000673684.1CAPN3-224521No protein-
 
Retained intron
----
Statistics

Exons: 11, Coding exons: 7, Transcript length: 1,148 bps, Translation length: 156 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10086

Uniprot

This transcript corresponds to the following Uniprot identifiers: P20807

Transcript Support Level (TSL)

TSL:2

Version

ENST00000569136.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x329e82b8)