Human (GRCh38.p14)
Description

serrate, RNA effector molecule [Source:HGNC Symbol;Acc:HGNC:24101]

Gene Synonyms

ARS2, ASR2, SERRATE

About this transcript

This transcript has 20 exons, is annotated with 49 domains and features, is associated with 8226 variant alleles and maps to 825 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000611405.5SRRT-2132990876aaENSP00000480421.1
 
Protein coding
CCDS34709Q9BXP5-1 NM_015908.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENST00000614484.4SRRT-2152964875aaENSP00000481173.1
 
Protein coding
CCDS47666Q9BXP5-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000618262.4SRRT-2162955872aaENSP00000478341.1
 
Protein coding
CCDS47665Q9BXP5-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000618411.4SRRT-2172893871aaENSP00000483556.1
 
Protein coding
CCDS47667Q9BXP5-4 -GENCODE basicAPPRIS P4TSL:1
ENST00000448764.5SRRT-2041607499aaENSP00000410588.1
 
Protein coding
H7C3A1 -TSL:5CDS 5' incomplete
ENST00000431645.1SRRT-202397112aaENSP00000400912.1
 
Protein coding
C9JUL9 -TSL:2CDS 3' incomplete
ENST00000445337.1SRRT-203446148aaENSP00000398618.1
 
Non stop decay
A0A0A0MSP6 -TSL:3CDS 5' incomplete
ENST00000641476.1SRRT-21999263aaENSP00000492916.1
 
Nonsense mediated decay
A0A286YEP7 -CDS 5' incomplete
ENST00000423692.5SRRT-20172777aaENSP00000396807.1
 
Nonsense mediated decay
H7C0U8 -TSL:5CDS 5' incomplete
ENST00000614370.4SRRT-21455650aaENSP00000483348.1
 
Nonsense mediated decay
A0A087X0F4 -TSL:2
ENST00000449389.1SRRT-20544847aaENSP00000400703.1
 
Nonsense mediated decay
H7C1K0 -TSL:3CDS 5' incomplete
ENST00000474896.1SRRT-209726No protein-
 
Retained intron
--TSL:3
ENST00000478693.1SRRT-211655No protein-
 
Retained intron
--TSL:2
ENST00000620394.1SRRT-218582No protein-
 
Retained intron
--TSL:2
ENST00000460194.1SRRT-206575No protein-
 
Retained intron
--TSL:2
ENST00000487311.1SRRT-212563No protein-
 
Retained intron
--TSL:2
ENST00000477529.1SRRT-210540No protein-
 
Retained intron
--TSL:2
ENST00000466432.1SRRT-207378No protein-
 
Retained intron
--TSL:2
ENST00000469602.1SRRT-208376No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 20, Coding exons: 19, Transcript length: 2,990 bps, Translation length: 876 residues

MANE

This MANE Select transcript contains ENSP00000480421 and matches to NM_015908.6 and NP_056992.4

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BXP5

CCDS

This transcript is a member of the Human CCDS set: CCDS34709

Transcript Support Level (TSL)

TSL:1

Version

ENST00000611405.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.