Human (GRCh38.p14)
Description

ubiquitin specific peptidase 40 [Source:HGNC Symbol;Acc:HGNC:20069]

Gene Synonyms

FLJ10785

About this transcript

This transcript has 31 exons, is annotated with 16 domains and features, is associated with 36980 variant alleles and maps to 859 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000678225.2USP40-21756951236aaENSP00000502952.1
 
Protein coding
CCDS92972A0A7I2YQ75 NM_001365479.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3
ENST00000251722.10USP40-20156921235aaENSP00000251722.6
 
Protein coding
CCDS46547Q9NVE5-1 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000427112.6USP40-20337441235aaENSP00000387898.2
 
Protein coding
CCDS46547Q9NVE5-1 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000430158.5USP40-2051047246aaENSP00000388121.1
 
Protein coding
H7BZ71 -TSL:3CDS 5' incomplete
ENST00000443711.2USP40-20662898aaENSP00000394154.2
 
Protein coding
CCDS92973C9JK14 -GENCODE basicTSL:2
ENST00000452724.1USP40-20845398aaENSP00000408853.1
 
Protein coding
H7C307 -TSL:3CDS 5' incomplete
ENST00000454354.1USP40-209348116aaENSP00000394133.1
 
Protein coding
H7C0C4 -TSL:2CDS 5' and 3' incomplete
ENST00000450940.5USP40-20767097aaENSP00000407696.1
 
Nonsense mediated decay
H7C2T9 -TSL:3CDS 5' incomplete
ENST00000496298.5USP40-216665No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000485943.1USP40-215568No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000464956.1USP40-210185No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000483519.5USP40-2132722No protein-
 
Retained intron
--TSL:1
ENST00000409945.1USP40-2021946No protein-
 
Retained intron
--TSL:2
ENST00000484528.1USP40-214933No protein-
 
Retained intron
--TSL:2
ENST00000427947.7USP40-204794No protein-
 
Retained intron
--TSL:2
ENST00000483216.1USP40-212641No protein-
 
Retained intron
--TSL:4
ENST00000473191.1USP40-211590No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 31, Coding exons: 31, Transcript length: 3,744 bps, Translation length: 1,235 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NVE5

CCDS

This transcript is a member of the Human CCDS set: CCDS46547

Transcript Support Level (TSL)

TSL:1

Version

ENST00000427112.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.