Human (GRCh38.p14)
Description

collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]

Location
About this transcript

This transcript has 41 exons, is annotated with 28 domains and features, is associated with 11805 variant alleles and maps to 707 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000373672.8COL16A1-20354181604aaENSP00000362776.3
 
Protein coding
CCDS41297Q07092-1 NM_001856.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000373668.7COL16A1-2023643966aaENSP00000362772.3
 
Protein coding
A6NCT7 -GENCODE basicTSL:2
ENST00000373667.4COL16A1-201924308aaENSP00000362771.4
 
Protein coding
H7BY97 -TSL:5CDS 5' and 3' incomplete
ENST00000458715.5COL16A1-205706235aaENSP00000411457.1
 
Protein coding
H7C3F0 -TSL:5CDS 5' and 3' incomplete
ENST00000440437.1COL16A1-204672224aaENSP00000390281.1
 
Protein coding
H7BZL8 -TSL:5CDS 5' and 3' incomplete
ENST00000461217.1COL16A1-206852No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000482478.5COL16A1-212797No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000474000.5COL16A1-210676No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000468459.5COL16A1-208620No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000529928.1COL16A1-216581No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000532877.1COL16A1-217534No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000466829.5COL16A1-207254No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000488128.6COL16A1-2142854No protein-
 
Retained intron
--TSL:5
ENST00000488897.5COL16A1-2152423No protein-
 
Retained intron
--TSL:1
ENST00000470799.5COL16A1-209826No protein-
 
Retained intron
--TSL:5
ENST00000479100.1COL16A1-211740No protein-
 
Retained intron
--TSL:5
ENST00000482910.1COL16A1-213676No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 41, Coding exons: 40, Transcript length: 3,643 bps, Translation length: 966 residues

Transcript Support Level (TSL)

TSL:2

Version

ENST00000373668.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.