Human (GRCh38.p14)
Description

ELKS/RAB6-interacting/CAST family member 1 [Source:HGNC Symbol;Acc:HGNC:17072]

Gene Synonyms

CAST2, ELKS, KIAA1081, MGC12974, RAB6IP2

Location
About this transcript

This transcript has 20 exons, is associated with 228722 variant alleles and maps to 1144 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000360905.9ERC1-20393081116aaENSP00000354158.3
 
Protein coding
CCDS8508Q8IUD2-1 NM_178040.4MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000543086.7ERC1-21392411088aaENSP00000438546.1
 
Protein coding
CCDS53732Q8IUD2-3 -GENCODE basicAPPRIS P1TSL:1
ENST00000397203.7ERC1-20470331116aaENSP00000380386.4
 
Protein coding
CCDS8508Q8IUD2-1 -GENCODE basicTSL:5
ENST00000589028.6ERC1-22169751116aaENSP00000468263.1
 
Protein coding
CCDS8508Q8IUD2-1 -GENCODE basicTSL:1
ENST00000355446.9ERC1-20257961086aaENSP00000347621.5
 
Protein coding
CCDS76504G8JLD3 -GENCODE basicTSL:1
ENST00000546231.6ERC1-21943901120aaENSP00000442739.2
 
Protein coding
X6RLX0 -GENCODE basicTSL:5
ENST00000611180.5ERC1-2242694805aaENSP00000479523.2
 
Protein coding
A0A8J9C065 -TSL:5CDS 3' incomplete
ENST00000545318.3ERC1-2172292682aaENSP00000465628.2
 
Protein coding
K7EKH8 -TSL:3CDS 3' incomplete
ENST00000592048.5ERC1-2231275344aaENSP00000467476.1
 
Protein coding
K7EPP6 -TSL:5CDS 3' incomplete
ENST00000688324.1ERC1-2261025341aaENSP00000510615.1
 
Protein coding
A0A8I5KS52 -CDS 5' and 3' incomplete
ENST00000589132.1ERC1-222868145aaENSP00000464959.1
 
Protein coding
K7EIZ7 -TSL:3CDS 3' incomplete
ENST00000689995.1ERC1-227795265aaENSP00000509777.1
 
Protein coding
A0A8I5QKW1 -CDS 5' and 3' incomplete
ENST00000539802.2ERC1-21055089aaENSP00000467196.1
 
Protein coding
K7EP25 -TSL:2CDS 5' incomplete
ENST00000440394.7ERC1-2057040992aaENSP00000410064.2
 
Nonsense mediated decay
Q8IUD2-2 -TSL:1
ENST00000347735.10ERC1-2014955948aaENSP00000340054.6
 
Nonsense mediated decay
Q8IUD2-4 -TSL:1
ENST00000542302.6ERC1-2124323976aaENSP00000445336.2
 
Nonsense mediated decay
X6RM00 -TSL:5
ENST00000545948.5ERC1-2182881720aaENSP00000442976.1
 
Nonsense mediated decay
Q8IUD2-5 -TSL:1
ENST00000588412.5ERC1-2202071285aaENSP00000467339.1
 
Nonsense mediated decay
K7EPD6 -TSL:2CDS 5' incomplete
ENST00000691177.1ERC1-23267243aaENSP00000510024.1
 
Nonsense mediated decay
A0A8I5KT07 -CDS 5' incomplete
ENST00000691140.1ERC1-2313982No protein-
 
Protein coding CDS not defined
---
ENST00000536573.7ERC1-2073369No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000690948.1ERC1-2292594No protein-
 
Protein coding CDS not defined
---
ENST00000690222.1ERC1-2282589No protein-
 
Protein coding CDS not defined
---
ENST00000515210.2ERC1-206591No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000543263.2ERC1-215513No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000544277.1ERC1-216319No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000686476.1ERC1-2253165No protein-
 
Retained intron
---
ENST00000691018.1ERC1-2303009No protein-
 
Retained intron
---
ENST00000692909.1ERC1-2332452No protein-
 
Retained intron
---
ENST00000543151.1ERC1-2142447No protein-
 
Retained intron
--TSL:2
ENST00000538971.6ERC1-2082267No protein-
 
Retained intron
--TSL:2
ENST00000539007.5ERC1-209748No protein-
 
Retained intron
--TSL:3
ENST00000541503.1ERC1-211531No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 20, Coding exons: 17, Transcript length: 7,040 bps, Translation length: 992 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IUD2

Transcript Support Level (TSL)

TSL:1

Version

ENST00000440394.7

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.