Human (GRCh38.p14)
Description

ELKS/RAB6-interacting/CAST family member 1 [Source:HGNC Symbol;Acc:HGNC:17072]

Gene Synonyms

CAST2, ELKS, KIAA1081, MGC12974, RAB6IP2

Location
About this transcript

This transcript has 4 exons, is associated with 25790 variant alleles and maps to 69 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000360905.9ERC1-20393081116aaENSP00000354158.3
 
Protein coding
CCDS8508Q8IUD2-1 NM_178040.4MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000543086.7ERC1-21392411088aaENSP00000438546.1
 
Protein coding
CCDS53732Q8IUD2-3 -GENCODE basicAPPRIS P1TSL:1
ENST00000397203.7ERC1-20470331116aaENSP00000380386.4
 
Protein coding
CCDS8508Q8IUD2-1 -GENCODE basicTSL:5
ENST00000589028.6ERC1-22169751116aaENSP00000468263.1
 
Protein coding
CCDS8508Q8IUD2-1 -GENCODE basicTSL:1
ENST00000355446.9ERC1-20257961086aaENSP00000347621.5
 
Protein coding
CCDS76504G8JLD3 -GENCODE basicTSL:1
ENST00000546231.6ERC1-21943901120aaENSP00000442739.2
 
Protein coding
X6RLX0 -GENCODE basicTSL:5
ENST00000611180.5ERC1-2242694805aaENSP00000479523.2
 
Protein coding
A0A8J9C065 -TSL:5CDS 3' incomplete
ENST00000545318.3ERC1-2172292682aaENSP00000465628.2
 
Protein coding
K7EKH8 -TSL:3CDS 3' incomplete
ENST00000592048.5ERC1-2231275344aaENSP00000467476.1
 
Protein coding
K7EPP6 -TSL:5CDS 3' incomplete
ENST00000688324.1ERC1-2261025341aaENSP00000510615.1
 
Protein coding
A0A8I5KS52 -CDS 5' and 3' incomplete
ENST00000589132.1ERC1-222868145aaENSP00000464959.1
 
Protein coding
K7EIZ7 -TSL:3CDS 3' incomplete
ENST00000689995.1ERC1-227795265aaENSP00000509777.1
 
Protein coding
A0A8I5QKW1 -CDS 5' and 3' incomplete
ENST00000539802.2ERC1-21055089aaENSP00000467196.1
 
Protein coding
K7EP25 -TSL:2CDS 5' incomplete
ENST00000440394.7ERC1-2057040992aaENSP00000410064.2
 
Nonsense mediated decay
Q8IUD2-2 -TSL:1
ENST00000347735.10ERC1-2014955948aaENSP00000340054.6
 
Nonsense mediated decay
Q8IUD2-4 -TSL:1
ENST00000542302.6ERC1-2124323976aaENSP00000445336.2
 
Nonsense mediated decay
X6RM00 -TSL:5
ENST00000545948.5ERC1-2182881720aaENSP00000442976.1
 
Nonsense mediated decay
Q8IUD2-5 -TSL:1
ENST00000588412.5ERC1-2202071285aaENSP00000467339.1
 
Nonsense mediated decay
K7EPD6 -TSL:2CDS 5' incomplete
ENST00000691177.1ERC1-23267243aaENSP00000510024.1
 
Nonsense mediated decay
A0A8I5KT07 -CDS 5' incomplete
ENST00000691140.1ERC1-2313982No protein-
 
Protein coding CDS not defined
---
ENST00000536573.7ERC1-2073369No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000690948.1ERC1-2292594No protein-
 
Protein coding CDS not defined
---
ENST00000690222.1ERC1-2282589No protein-
 
Protein coding CDS not defined
---
ENST00000515210.2ERC1-206591No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000543263.2ERC1-215513No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000544277.1ERC1-216319No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000686476.1ERC1-2253165No protein-
 
Retained intron
---
ENST00000691018.1ERC1-2303009No protein-
 
Retained intron
---
ENST00000692909.1ERC1-2332452No protein-
 
Retained intron
---
ENST00000543151.1ERC1-2142447No protein-
 
Retained intron
--TSL:2
ENST00000538971.6ERC1-2082267No protein-
 
Retained intron
--TSL:2
ENST00000539007.5ERC1-209748No protein-
 
Retained intron
--TSL:3
ENST00000541503.1ERC1-211531No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 4, Coding exons: 0, Transcript length: 319 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000544277.1

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.