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EnsemblEnsembl Home
Description

C-type lectin domain containing 7A [Source:HGNC Symbol;Acc:HGNC:14558]

Gene Synonyms

CD369, CLECSF12, DECTIN-1, SCARE2, hDectin-1

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000304084.13CLEC7A-2022542247aaENSP00000302569.8
 
Protein coding
CCDS41753Q9BXN2-1 NM_197947.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000353231.9CLEC7A-2052446201aaENSP00000266456.6
 
Protein coding
CCDS8613Q9BXN2-2 -GENCODE basicAPPRIS P3TSL:1
ENST00000298523.9CLEC7A-2011154143aaENSP00000298523.5
 
Protein coding
CCDS53744Q9BXN2-7 -GENCODE basicTSL:1
ENST00000396484.6CLEC7A-2061000168aaENSP00000379743.2
 
Protein coding
CCDS8614Q9BXN2-5 -GENCODE basicTSL:1
ENST00000533022.5CLEC7A-212625189aaENSP00000431461.1
 
Protein coding
CCDS41754Q9BXN2-3 -GENCODE basicTSL:1
ENST00000310002.4CLEC7A-20342577aaENSP00000312089.4
 
Protein coding
CCDS8617Q9BXN2-9 -GENCODE basicTSL:1
ENST00000525605.1CLEC7A-208573136aaENSP00000434954.1
 
Protein coding
-Q68D78 -GENCODE basicTSL:4
ENST00000529761.5CLEC7A-2101592247aaENSP00000432876.1
 
Nonsense mediated decay
CCDS41753Q9BXN2-1 -TSL:1
ENST00000531192.5CLEC7A-211915192aaENSP00000434392.1
 
Nonsense mediated decay
-Q9BXN2-4 -TSL:2
ENST00000465100.5CLEC7A-207881116aaENSP00000436923.1
 
Nonsense mediated decay
-Q9BXN2-10 -TSL:1
ENST00000349926.9CLEC7A-20435545aaENSP00000344723.5
 
Nonsense mediated decay
-Q9BXN2-8 -TSL:1
ENST00000534609.5CLEC7A-2133725No protein-
 
Retained intron
---TSL:1
ENST00000528799.1CLEC7A-2091006No protein-
 
Retained intron
---TSL:1
Description

SOX9 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49321]

Gene Synonyms

FLJ37644

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000533232.5SOX9-AS1-2101739No protein-
 
Retained intron
--TSL:1
ENST00000533996.5SOX9-AS1-2111001No protein-
 
Retained intron
--TSL:5
ENST00000532249.1SOX9-AS1-207577No protein-
 
Retained intron
--TSL:3
ENST00000662263.1SOX9-AS1-2244476No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000659146.1SOX9-AS1-2213395No protein-
 
lncRNA
--GENCODE basic
ENST00000434703.5SOX9-AS1-2023032No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000653248.1SOX9-AS1-2142765No protein-
 
lncRNA
--GENCODE basic
ENST00000659228.1SOX9-AS1-2222628No protein-
 
lncRNA
---
ENST00000655689.1SOX9-AS1-2172408No protein-
 
lncRNA
---
ENST00000668782.1SOX9-AS1-2291817No protein-
 
lncRNA
---
ENST00000670181.1SOX9-AS1-2321812No protein-
 
lncRNA
--GENCODE basic
ENST00000659599.1SOX9-AS1-2231633No protein-
 
lncRNA
--GENCODE basic
ENST00000623935.1SOX9-AS1-2131563No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000663438.1SOX9-AS1-2261392No protein-
 
lncRNA
---
ENST00000666904.1SOX9-AS1-2281341No protein-
 
lncRNA
---
ENST00000671151.1SOX9-AS1-2331258No protein-
 
lncRNA
---
ENST00000668902.1SOX9-AS1-2311229No protein-
 
lncRNA
---
ENST00000662298.1SOX9-AS1-2251165No protein-
 
lncRNA
---
ENST00000656392.1SOX9-AS1-2191165No protein-
 
lncRNA
---
ENST00000414600.1SOX9-AS1-201742No protein-
 
lncRNA
--TSL:3
ENST00000656124.1SOX9-AS1-218719No protein-
 
lncRNA
---
ENST00000655414.1SOX9-AS1-216714No protein-
 
lncRNA
--GENCODE basic
ENST00000668847.1SOX9-AS1-230708No protein-
 
lncRNA
---
ENST00000664713.1SOX9-AS1-227655No protein-
 
lncRNA
---
ENST00000653391.1SOX9-AS1-215518No protein-
 
lncRNA
---
ENST00000657467.1SOX9-AS1-220482No protein-
 
lncRNA
---
ENST00000440093.6SOX9-AS1-203468No protein-
 
lncRNA
--TSL:3
ENST00000588177.1SOX9-AS1-212465No protein-
 
lncRNA
--TSL:2
ENST00000533179.1SOX9-AS1-209460No protein-
 
lncRNA
--TSL:3
ENST00000446332.1SOX9-AS1-205443No protein-
 
lncRNA
--TSL:2
ENST00000533039.2SOX9-AS1-208426No protein-
 
lncRNA
--TSL:3
ENST00000443037.1SOX9-AS1-204394No protein-
 
lncRNA
--TSL:2
ENST00000529667.1SOX9-AS1-206340No protein-
 
lncRNA
--GENCODE basicTSL:3
Description

solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]

Gene Synonyms

EA6, EAAT1, GLAST

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000265113.9SLC1A3-2013919542aaENSP00000265113.4
 
Protein coding
CCDS3919P43003-1 NM_004172.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000679983.1SLC1A3-2244466542aaENSP00000505238.1
 
Protein coding
CCDS3919A0A024R050 -GENCODE basicAPPRIS P1
ENST00000680125.1SLC1A3-2293918497aaENSP00000506424.1
 
Protein coding
CCDS54844--GENCODE basic
ENST00000679992.1SLC1A3-2253908542aaENSP00000506585.1
 
Protein coding
CCDS3919A0A024R050 -GENCODE basicAPPRIS P1
ENST00000680318.1SLC1A3-2333877542aaENSP00000505057.1
 
Protein coding
CCDS3919A0A024R050 -GENCODE basicAPPRIS P1
ENST00000681926.1SLC1A3-2603859497aaENSP00000505850.1
 
Protein coding
CCDS54844--GENCODE basic
ENST00000613445.5SLC1A3-2163841496aaENSP00000477672.1
 
Protein coding
CCDS78004A0A087WT87 -GENCODE basicTSL:5
ENST00000381918.4SLC1A3-2023834542aaENSP00000371343.4
 
Protein coding
CCDS3919P43003-2 -GENCODE basicAPPRIS P1TSL:1
ENST00000612708.5SLC1A3-2153717430aaENSP00000483657.1
 
Protein coding
CCDS78003A0A087X0U3 -GENCODE basicTSL:5
ENST00000681909.1SLC1A3-2592273496aaENSP00000506599.1
 
Protein coding
CCDS78004--GENCODE basic
ENST00000680232.1SLC1A3-2324194589aaENSP00000506207.1
 
Protein coding
---GENCODE basic
ENST00000679958.1SLC1A3-2232811133aaENSP00000505246.1
 
Protein coding
---GENCODE basic
ENST00000679852.1SLC1A3-2222501146aaENSP00000506649.1
 
Protein coding
---CDS 5' incomplete
ENST00000512374.1SLC1A3-211109665aaENSP00000506048.1
 
Protein coding
-Q7Z5T0 -GENCODE basicTSL:1
ENST00000513903.5SLC1A3-213784101aaENSP00000427203.1
 
Protein coding
-E7EUS7 -TSL:2CDS 3' incomplete
ENST00000504121.5SLC1A3-20558365aaENSP00000506577.1
 
Protein coding
-Q7Z5T0 -GENCODE basicTSL:2
ENST00000513646.1SLC1A3-212566106aaENSP00000420992.1
 
Protein coding
-E7EUV6 -TSL:2CDS 3' incomplete
ENST00000681776.1SLC1A3-25455037aaENSP00000506165.1
 
Protein coding
---CDS 3' incomplete
ENST00000505202.5SLC1A3-206540106aaENSP00000424986.1
 
Protein coding
-E7EUV6 -TSL:4CDS 3' incomplete
ENST00000680890.1SLC1A3-242488162aaENSP00000505580.1
 
Protein coding
---CDS 5' and 3' incomplete
ENST00000681854.1SLC1A3-258446148aaENSP00000504899.1
 
Protein coding
---CDS 5' and 3' incomplete
ENST00000681795.1SLC1A3-25540934aaENSP00000505679.1
 
Protein coding
---CDS 3' incomplete
ENST00000681440.1SLC1A3-24638347aaENSP00000505212.1
 
Protein coding
---CDS 5' incomplete
ENST00000680369.1SLC1A3-234369123aaENSP00000505836.1
 
Protein coding
---CDS 5' and 3' incomplete
ENST00000680048.1SLC1A3-2274820133aaENSP00000505296.1
 
Nonsense mediated decay
----
ENST00000679784.1SLC1A3-2214227129aaENSP00000506030.1
 
Nonsense mediated decay
----
ENST00000680655.1SLC1A3-2374027129aaENSP00000506436.1
 
Nonsense mediated decay
----
ENST00000681701.1SLC1A3-25173292aaENSP00000505760.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000681480.1SLC1A3-247729165aaENSP00000506380.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000679423.1SLC1A3-219705126aaENSP00000505306.1
 
Nonsense mediated decay
----
ENST00000680908.1SLC1A3-24367170aaENSP00000505338.1
 
Nonsense mediated decay
----
ENST00000680527.1SLC1A3-23561571aaENSP00000504868.1
 
Nonsense mediated decay
----
ENST00000680835.1SLC1A3-239607125aaENSP00000504901.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000681726.1SLC1A3-25245723aaENSP00000505982.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000679487.1SLC1A3-22034425aaENSP00000505196.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000506725.1SLC1A3-2091137No protein-
 
Processed transcript
---TSL:2
ENST00000680711.1SLC1A3-238906No protein-
 
Processed transcript
----
ENST00000505376.1SLC1A3-207567No protein-
 
Processed transcript
---TSL:4
ENST00000416645.6SLC1A3-203558No protein-
 
Processed transcript
---TSL:2
ENST00000509272.1SLC1A3-210545No protein-
 
Processed transcript
---TSL:4
ENST00000514563.5SLC1A3-214540No protein-
 
Processed transcript
---TSL:4
ENST00000681848.1SLC1A3-257306No protein-
 
Processed transcript
----
ENST00000680212.1SLC1A3-231306No protein-
 
Processed transcript
----
ENST00000680016.1SLC1A3-226291No protein-
 
Processed transcript
----
ENST00000681666.1SLC1A3-250289No protein-
 
Processed transcript
----
ENST00000679384.1SLC1A3-218264No protein-
 
Processed transcript
----
ENST00000681373.1SLC1A3-244235No protein-
 
Processed transcript
----
ENST00000681623.1SLC1A3-248168No protein-
 
Processed transcript
----
ENST00000681388.1SLC1A3-24564No protein-
 
Processed transcript
----
ENST00000680876.1SLC1A3-2406868No protein-
 
Retained intron
----
ENST00000680878.1SLC1A3-2416727No protein-
 
Retained intron
----
ENST00000624112.2SLC1A3-2176683No protein-
 
Retained intron
---TSL:NA
ENST00000681633.1SLC1A3-2496495No protein-
 
Retained intron
----
ENST00000680064.1SLC1A3-2284393No protein-
 
Retained intron
----
ENST00000680205.1SLC1A3-2303699No protein-
 
Retained intron
----
ENST00000680568.1SLC1A3-2362915No protein-
 
Retained intron
----
ENST00000681775.1SLC1A3-2532368No protein-
 
Retained intron
----
ENST00000681814.1SLC1A3-2561577No protein-
 
Retained intron
----
ENST00000502864.6SLC1A3-2041204No protein-
 
Retained intron
---TSL:3
ENST00000506178.1SLC1A3-208547No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 3, Coding exons: 2, Transcript length: 615 bps, Translation length: 71 residues

Version

ENST00000680527.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred exon combination [Definitions]

RNA-Seq supported only

Transcript-based displays

    HASH(0x28400640)