Human (GRCh38.p14)
Description

RUNX1 partner transcriptional co-repressor 1 [Source:HGNC Symbol;Acc:HGNC:1535]

Gene Synonyms

AML1T1, CBFA2T1, CDR, ETO, MTG8, ZMYND2

Location
About this transcript

This transcript has 12 exons, is annotated with 50 domains and features, is associated with 64191 variant alleles and maps to 1046 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000523629.7RUNX1T1-2457699604aaENSP00000428543.1
 
Protein coding
CCDS6256Q06455-1 NM_175634.3MANE SelectEnsembl CanonicalGENCODE basicTSL:5
ENST00000396218.5RUNX1T1-2023463577aaENSP00000379520.1
 
Protein coding
CCDS47891Q06455-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000518317.6RUNX1T1-2093358577aaENSP00000429062.2
 
Protein coding
CCDS47891E5RJE7 -GENCODE basicAPPRIS P4TSL:4
ENST00000436581.7RUNX1T1-2042792663aaENSP00000402257.3
 
Protein coding
CCDS75766A0A0A0MSU1 -GENCODE basicTSL:5
ENST00000519847.6RUNX1T1-2202777604aaENSP00000430204.2
 
Protein coding
CCDS6256E7EWJ9 -GENCODE basicTSL:5
ENST00000518954.6RUNX1T1-2152657604aaENSP00000430080.2
 
Protein coding
CCDS6256E7EX23 -GENCODE basicTSL:4
ENST00000517919.6RUNX1T1-2072613604aaENSP00000429506.2
 
Protein coding
CCDS6256E7EQW7 -GENCODE basicTSL:4
ENST00000518832.2RUNX1T1-2132577584aaENSP00000429864.2
 
Protein coding
CCDS75767A0A087WWT6 E5RH72 -GENCODE basicAPPRIS ALT1TSL:4
ENST00000518844.5RUNX1T1-2142453577aaENSP00000430728.1
 
Protein coding
CCDS47891Q06455-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000422361.6RUNX1T1-2032450567aaENSP00000390137.2
 
Protein coding
CCDS6257Q06455-4 -GENCODE basicTSL:1
ENST00000360348.6RUNX1T1-2012370567aaENSP00000353504.2
 
Protein coding
CCDS6257Q06455-4 -GENCODE basicTSL:1
ENST00000520724.5RUNX1T1-2262103615aaENSP00000428742.2
 
Protein coding
CCDS56544Q06455-3 -GENCODE basicTSL:2
ENST00000521553.5RUNX1T1-2331346210aaENSP00000429728.1
 
Protein coding
E5RHJ8 -GENCODE basicTSL:1
ENST00000518992.5RUNX1T1-216976229aaENSP00000431094.1
 
Protein coding
E7ETA8 -TSL:4CDS 3' incomplete
ENST00000521319.5RUNX1T1-23173088aaENSP00000429137.1
 
Protein coding
E5RJB3 -TSL:5CDS 3' incomplete
ENST00000522467.5RUNX1T1-241690156aaENSP00000429532.1
 
Protein coding
E7EQW3 -TSL:4CDS 3' incomplete
ENST00000521375.5RUNX1T1-23259693aaENSP00000429666.1
 
Protein coding
E7EQI9 -TSL:2CDS 3' incomplete
ENST00000521054.5RUNX1T1-229585171aaENSP00000427763.1
 
Protein coding
E5RG85 -TSL:4CDS 3' incomplete
ENST00000520556.5RUNX1T1-22457491aaENSP00000428100.1
 
Protein coding
E5RK76 -TSL:4CDS 3' incomplete
ENST00000520583.5RUNX1T1-225573120aaENSP00000430070.1
 
Protein coding
A0A1B0GX92 -TSL:4CDS 3' incomplete
ENST00000521733.5RUNX1T1-234572101aaENSP00000430637.1
 
Protein coding
E5RJ32 -TSL:4CDS 3' incomplete
ENST00000520974.5RUNX1T1-22756485aaENSP00000429375.1
 
Protein coding
E7ERJ9 -TSL:4CDS 3' incomplete
ENST00000518823.5RUNX1T1-21255679aaENSP00000428475.1
 
Protein coding
E5RI38 -TSL:4CDS 3' incomplete
ENST00000523168.5RUNX1T1-243553119aaENSP00000429118.1
 
Protein coding
E7ESA9 -TSL:4CDS 3' incomplete
ENST00000517792.5RUNX1T1-206548120aaENSP00000429940.1
 
Protein coding
E5RH30 -TSL:5CDS 3' incomplete
ENST00000519061.5RUNX1T1-21754426aaENSP00000430334.1
 
Protein coding
E5RFQ3 -TSL:4CDS 3' incomplete
ENST00000520428.5RUNX1T1-22349148aaENSP00000429857.1
 
Protein coding
E7EQ59 -TSL:4CDS 3' incomplete
ENST00000522163.6RUNX1T1-239275368aaENSP00000516585.1
 
Nonsense mediated decay
--TSL:5
ENST00000520978.5RUNX1T1-22888230aaENSP00000429085.1
 
Nonsense mediated decay
H0YBA6 -TSL:4CDS 5' incomplete
ENST00000521751.5RUNX1T1-235870127aaENSP00000430778.1
 
Nonsense mediated decay
H0YC25 -TSL:1CDS 5' incomplete
ENST00000519422.5RUNX1T1-21863036aaENSP00000429587.1
 
Nonsense mediated decay
E7EQJ1 -TSL:4
ENST00000519577.5RUNX1T1-21958636aaENSP00000430084.1
 
Nonsense mediated decay
E7EQJ1 -TSL:4
ENST00000524215.5RUNX1T1-24656568aaENSP00000429034.1
 
Nonsense mediated decay
E7ESL1 -TSL:4
ENST00000521897.5RUNX1T1-23655736aaENSP00000429653.1
 
Nonsense mediated decay
E7EQJ1 -TSL:4
ENST00000518361.1RUNX1T1-21043131aaENSP00000430863.1
 
Nonsense mediated decay
H0YC43 -TSL:5CDS 5' incomplete
ENST00000517493.5RUNX1T1-205708No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000520172.5RUNX1T1-222569No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000518256.5RUNX1T1-208563No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000518449.5RUNX1T1-211553No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000522860.5RUNX1T1-242547No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000522065.5RUNX1T1-238542No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000521902.5RUNX1T1-237535No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000522316.1RUNX1T1-240504No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000523290.5RUNX1T1-2442061No protein-
 
Retained intron
--TSL:2
ENST00000520047.1RUNX1T1-2211872No protein-
 
Retained intron
--TSL:2
ENST00000521078.1RUNX1T1-230781No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 12, Coding exons: 11, Transcript length: 7,699 bps, Translation length: 604 residues

MANE

This MANE Select transcript contains ENSP00000428543 and matches to NM_175634.3 and NP_783552.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q06455

CCDS

This transcript is a member of the Human CCDS set: CCDS6256

Transcript Support Level (TSL)

TSL:5

Version

ENST00000523629.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.