Human (GRCh38.p14)
Description

RUNX1 partner transcriptional co-repressor 1 [Source:HGNC Symbol;Acc:HGNC:1535]

Gene Synonyms

AML1T1, CBFA2T1, CDR, ETO, MTG8, ZMYND2

Location
About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 5959 variant alleles and maps to 283 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000523629.7RUNX1T1-2457699604aaENSP00000428543.1
 
Protein coding
CCDS6256Q06455-1 NM_175634.3MANE SelectEnsembl CanonicalGENCODE basicTSL:5
ENST00000396218.5RUNX1T1-2023463577aaENSP00000379520.1
 
Protein coding
CCDS47891Q06455-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000518317.6RUNX1T1-2093358577aaENSP00000429062.2
 
Protein coding
CCDS47891E5RJE7 -GENCODE basicAPPRIS P4TSL:4
ENST00000436581.7RUNX1T1-2042792663aaENSP00000402257.3
 
Protein coding
CCDS75766A0A0A0MSU1 -GENCODE basicTSL:5
ENST00000519847.6RUNX1T1-2202777604aaENSP00000430204.2
 
Protein coding
CCDS6256E7EWJ9 -GENCODE basicTSL:5
ENST00000518954.6RUNX1T1-2152657604aaENSP00000430080.2
 
Protein coding
CCDS6256E7EX23 -GENCODE basicTSL:4
ENST00000517919.6RUNX1T1-2072613604aaENSP00000429506.2
 
Protein coding
CCDS6256E7EQW7 -GENCODE basicTSL:4
ENST00000518832.2RUNX1T1-2132577584aaENSP00000429864.2
 
Protein coding
CCDS75767A0A087WWT6 E5RH72 -GENCODE basicAPPRIS ALT1TSL:4
ENST00000518844.5RUNX1T1-2142453577aaENSP00000430728.1
 
Protein coding
CCDS47891Q06455-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000422361.6RUNX1T1-2032450567aaENSP00000390137.2
 
Protein coding
CCDS6257Q06455-4 -GENCODE basicTSL:1
ENST00000360348.6RUNX1T1-2012370567aaENSP00000353504.2
 
Protein coding
CCDS6257Q06455-4 -GENCODE basicTSL:1
ENST00000520724.5RUNX1T1-2262103615aaENSP00000428742.2
 
Protein coding
CCDS56544Q06455-3 -GENCODE basicTSL:2
ENST00000521553.5RUNX1T1-2331346210aaENSP00000429728.1
 
Protein coding
E5RHJ8 -GENCODE basicTSL:1
ENST00000518992.5RUNX1T1-216976229aaENSP00000431094.1
 
Protein coding
E7ETA8 -TSL:4CDS 3' incomplete
ENST00000521319.5RUNX1T1-23173088aaENSP00000429137.1
 
Protein coding
E5RJB3 -TSL:5CDS 3' incomplete
ENST00000522467.5RUNX1T1-241690156aaENSP00000429532.1
 
Protein coding
E7EQW3 -TSL:4CDS 3' incomplete
ENST00000521375.5RUNX1T1-23259693aaENSP00000429666.1
 
Protein coding
E7EQI9 -TSL:2CDS 3' incomplete
ENST00000521054.5RUNX1T1-229585171aaENSP00000427763.1
 
Protein coding
E5RG85 -TSL:4CDS 3' incomplete
ENST00000520556.5RUNX1T1-22457491aaENSP00000428100.1
 
Protein coding
E5RK76 -TSL:4CDS 3' incomplete
ENST00000520583.5RUNX1T1-225573120aaENSP00000430070.1
 
Protein coding
A0A1B0GX92 -TSL:4CDS 3' incomplete
ENST00000521733.5RUNX1T1-234572101aaENSP00000430637.1
 
Protein coding
E5RJ32 -TSL:4CDS 3' incomplete
ENST00000520974.5RUNX1T1-22756485aaENSP00000429375.1
 
Protein coding
E7ERJ9 -TSL:4CDS 3' incomplete
ENST00000518823.5RUNX1T1-21255679aaENSP00000428475.1
 
Protein coding
E5RI38 -TSL:4CDS 3' incomplete
ENST00000523168.5RUNX1T1-243553119aaENSP00000429118.1
 
Protein coding
E7ESA9 -TSL:4CDS 3' incomplete
ENST00000517792.5RUNX1T1-206548120aaENSP00000429940.1
 
Protein coding
E5RH30 -TSL:5CDS 3' incomplete
ENST00000519061.5RUNX1T1-21754426aaENSP00000430334.1
 
Protein coding
E5RFQ3 -TSL:4CDS 3' incomplete
ENST00000520428.5RUNX1T1-22349148aaENSP00000429857.1
 
Protein coding
E7EQ59 -TSL:4CDS 3' incomplete
ENST00000522163.6RUNX1T1-239275368aaENSP00000516585.1
 
Nonsense mediated decay
--TSL:5
ENST00000520978.5RUNX1T1-22888230aaENSP00000429085.1
 
Nonsense mediated decay
H0YBA6 -TSL:4CDS 5' incomplete
ENST00000521751.5RUNX1T1-235870127aaENSP00000430778.1
 
Nonsense mediated decay
H0YC25 -TSL:1CDS 5' incomplete
ENST00000519422.5RUNX1T1-21863036aaENSP00000429587.1
 
Nonsense mediated decay
E7EQJ1 -TSL:4
ENST00000519577.5RUNX1T1-21958636aaENSP00000430084.1
 
Nonsense mediated decay
E7EQJ1 -TSL:4
ENST00000524215.5RUNX1T1-24656568aaENSP00000429034.1
 
Nonsense mediated decay
E7ESL1 -TSL:4
ENST00000521897.5RUNX1T1-23655736aaENSP00000429653.1
 
Nonsense mediated decay
E7EQJ1 -TSL:4
ENST00000518361.1RUNX1T1-21043131aaENSP00000430863.1
 
Nonsense mediated decay
H0YC43 -TSL:5CDS 5' incomplete
ENST00000517493.5RUNX1T1-205708No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000520172.5RUNX1T1-222569No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000518256.5RUNX1T1-208563No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000518449.5RUNX1T1-211553No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000522860.5RUNX1T1-242547No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000522065.5RUNX1T1-238542No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000521902.5RUNX1T1-237535No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000522316.1RUNX1T1-240504No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000523290.5RUNX1T1-2442061No protein-
 
Retained intron
--TSL:2
ENST00000520047.1RUNX1T1-2211872No protein-
 
Retained intron
--TSL:2
ENST00000521078.1RUNX1T1-230781No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,346 bps, Translation length: 210 residues

Transcript Support Level (TSL)

TSL:1

Version

ENST00000521553.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.