Human (GRCh38.p14)
Description

RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]

Gene Synonyms

A2BP1, FOX-1, HRNBP1

Location
About this transcript

This transcript has 17 exons, is annotated with 17 domains and features, is associated with 1333773 variant alleles and maps to 717 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000550418.6RBFOX1-2114884397aaENSP00000450031.1
 
Protein coding
CCDS55983Q9NWB1-1 NM_018723.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000674626.1RBFOX1-2244501354aaENSP00000502217.1
 
Protein coding
A0A6Q8PGE0 -GENCODE basic
ENST00000675842.1RBFOX1-2344254397aaENSP00000501599.1
 
Protein coding
CCDS55983Q9NWB1-1 -GENCODE basicAPPRIS ALT1
ENST00000675459.1RBFOX1-2304126374aaENSP00000502616.1
 
Protein coding
CCDS92101A0A6Q8PH77 -GENCODE basic
ENST00000355637.9RBFOX1-2024062395aaENSP00000347855.4
 
Protein coding
CCDS10532Q9NWB1-5 NM_145893.3MANE Plus ClinicalGENCODE basicTSL:1
ENST00000675653.1RBFOX1-2324019397aaENSP00000502718.1
 
Protein coding
CCDS55983Q9NWB1-1 -GENCODE basicAPPRIS ALT1
ENST00000620507.4RBFOX1-2224018375aaENSP00000484837.1
 
Protein coding
A0A087X2B1 -GENCODE basicTSL:5
ENST00000674792.1RBFOX1-2254002354aaENSP00000502682.1
 
Protein coding
A0A6Q8PGE0 -GENCODE basic
ENST00000683326.1RBFOX1-2393962376aaENSP00000507562.1
 
Protein coding
A0A804HJM2 -GENCODE basic
ENST00000675562.1RBFOX1-2313898415aaENSP00000501878.1
 
Protein coding
A0A6Q8PFM4 -GENCODE basic
ENST00000682918.1RBFOX1-2383851349aaENSP00000507921.1
 
Protein coding
A0A804HKG7 -GENCODE basic
ENST00000676218.1RBFOX1-2363835351aaENSP00000502646.1
 
Protein coding
A0A6Q8PHA3 -GENCODE basic
ENST00000570626.2RBFOX1-2203709372aaENSP00000458748.2
 
Protein coding
I3L1D4 -GENCODE basicTSL:5
ENST00000641259.1RBFOX1-2233651582aaENSP00000493041.1
 
Protein coding
A0A286YEU2 -GENCODE basic
ENST00000547372.5RBFOX1-2073524466aaENSP00000446842.1
 
Protein coding
CCDS92100F8VZG9 -GENCODE basicTSL:5
ENST00000311745.9RBFOX1-2013268418aaENSP00000309117.5
 
Protein coding
CCDS10531Q9NWB1-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000553186.5RBFOX1-2142196370aaENSP00000447753.1
 
Protein coding
CCDS55984Q9NWB1-3 -GENCODE basicTSL:1
ENST00000547605.5RBFOX1-2091811262aaENSP00000450402.1
 
Protein coding
F8VR27 -TSL:1CDS 3' incomplete
ENST00000422070.8RBFOX1-2031684425aaENSP00000391269.4
 
Protein coding
CCDS76818B7Z1U7 -GENCODE basicTSL:2
ENST00000535565.6RBFOX1-2051599380aaENSP00000438768.2
 
Protein coding
F5H0M1 -GENCODE basicTSL:2
ENST00000585867.2RBFOX1-2211580201aaENSP00000493140.1
 
Protein coding
A0A286YFF2 -GENCODE basicTSL:2
ENST00000436368.6RBFOX1-2041530392aaENSP00000402745.2
 
Protein coding
CCDS45405Q9NWB1-4 -GENCODE basicTSL:1
ENST00000547338.5RBFOX1-2061513397aaENSP00000447717.1
 
Protein coding
CCDS55983Q9NWB1-1 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000705321.1RBFOX1-2401507377aaENSP00000516112.1
 
Protein coding
A0A994J531 -GENCODE basicAPPRIS ALT1
ENST00000552089.5RBFOX1-2131430391aaENSP00000448496.1
 
Protein coding
F8VRS4 -GENCODE basicTSL:5
ENST00000551752.5RBFOX1-212974263aaENSP00000447281.1
 
Protein coding
F8VZY7 -TSL:1CDS 3' incomplete
ENST00000567470.1RBFOX1-21642074aaENSP00000454250.1
 
Protein coding
H3BM62 -TSL:2CDS 5' incomplete
ENST00000675725.1RBFOX1-2334796No protein-
 
Protein coding CDS not defined
---
ENST00000675904.1RBFOX1-2354547No protein-
 
Protein coding CDS not defined
---
ENST00000676253.1RBFOX1-2374496No protein-
 
Protein coding CDS not defined
---
ENST00000674859.1RBFOX1-2264378No protein-
 
Protein coding CDS not defined
---
ENST00000675242.1RBFOX1-2294323No protein-
 
Protein coding CDS not defined
---
ENST00000675077.1RBFOX1-2274320No protein-
 
Protein coding CDS not defined
---
ENST00000569895.3RBFOX1-218829No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000547427.5RBFOX1-208557No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000548749.5RBFOX1-210538No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000569889.1RBFOX1-217503No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000675140.1RBFOX1-2282960No protein-
 
Retained intron
---
ENST00000570188.1RBFOX1-219568No protein-
 
Retained intron
--TSL:2
ENST00000564850.1RBFOX1-215293No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 17, Coding exons: 17, Transcript length: 3,524 bps, Translation length: 466 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS92100

Transcript Support Level (TSL)

TSL:5

Version

ENST00000547372.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.