Human (GRCh38.p14)
Description

Rho guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:681]

Gene Synonyms

LBCL2, P115-RHOGEF, SUB1.5

Location
About this transcript

This transcript has 29 exons, is annotated with 33 domains and features, is associated with 12148 variant alleles and maps to 698 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000354532.8ARHGEF1-2033229912aaENSP00000346532.3
 
Protein coding
CCDS12591Q92888-1 NM_004706.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000599846.6ARHGEF1-2193392968aaENSP00000470715.1
 
Protein coding
CCDS92626M0QZR4 -GENCODE basicAPPRIS P3TSL:5
ENST00000706938.1ARHGEF1-2273347972aaENSP00000516658.1
 
Protein coding
--GENCODE basicAPPRIS ALT2
ENST00000698932.1ARHGEF1-2243240975aaENSP00000514042.1
 
Protein coding
A0A8V8TP90 -GENCODE basic
ENST00000337665.8ARHGEF1-2013171927aaENSP00000337261.3
 
Protein coding
CCDS12590Q92888-3 -GENCODE basicTSL:1
ENST00000347545.8ARHGEF1-2023091879aaENSP00000344429.3
 
Protein coding
CCDS12592Q92888-2 -GENCODE basicTSL:1
ENST00000378152.8ARHGEF1-2042986948aaENSP00000367394.3
 
Protein coding
Q92888-4 -GENCODE basicTSL:1
ENST00000599589.5ARHGEF1-2182636702aaENSP00000469735.1
 
Protein coding
M0QYC1 -TSL:1CDS 5' incomplete
ENST00000594258.1ARHGEF1-207919307aaENSP00000470042.1
 
Protein coding
M0QYS3 -TSL:3CDS 5' and 3' incomplete
ENST00000595723.5ARHGEF1-211872291aaENSP00000472466.1
 
Protein coding
M0R2C7 -TSL:5CDS 5' and 3' incomplete
ENST00000594521.5ARHGEF1-210826275aaENSP00000470557.1
 
Protein coding
M0QZH8 -TSL:5CDS 5' and 3' incomplete
ENST00000594417.1ARHGEF1-208769128aaENSP00000471942.1
 
Protein coding
M0R1K8 -TSL:3CDS 5' incomplete
ENST00000698934.1ARHGEF1-2263540983aaENSP00000514044.1
 
Nonsense mediated decay
A0A8V8TMH9 --
ENST00000698933.1ARHGEF1-2253239406aaENSP00000514043.1
 
Nonsense mediated decay
A0A8V8TMG9 --
ENST00000598812.5ARHGEF1-21758888aaENSP00000473229.1
 
Nonsense mediated decay
M0R3H5 -TSL:5CDS 5' incomplete
ENST00000600517.1ARHGEF1-22242868aaENSP00000469409.1
 
Nonsense mediated decay
M0QXV6 -TSL:3CDS 5' incomplete
ENST00000595770.1ARHGEF1-212663No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000596957.1ARHGEF1-214570No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000600274.5ARHGEF1-2203439No protein-
 
Retained intron
--TSL:1
ENST00000595897.5ARHGEF1-2132973No protein-
 
Retained intron
--TSL:1
ENST00000600387.5ARHGEF1-2212272No protein-
 
Retained intron
--TSL:3
ENST00000594044.1ARHGEF1-206834No protein-
 
Retained intron
--TSL:5
ENST00000617585.1ARHGEF1-223737No protein-
 
Retained intron
--TSL:2
ENST00000593609.1ARHGEF1-205576No protein-
 
Retained intron
--TSL:2
ENST00000598444.1ARHGEF1-215425No protein-
 
Retained intron
--TSL:2
ENST00000598587.1ARHGEF1-216359No protein-
 
Retained intron
--TSL:2
ENST00000594513.1ARHGEF1-209325No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 29, Coding exons: 28, Transcript length: 3,171 bps, Translation length: 927 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92888

CCDS

This transcript is a member of the Human CCDS set: CCDS12590

Transcript Support Level (TSL)

TSL:1

Version

ENST00000337665.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.