Human (GRCh38.p14)
Description

tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]

Gene Synonyms

CCA1, CGI-47, MTCCA

Location
About this transcript

This transcript has 8 exons, is annotated with 13 domains and features, is associated with 12499 variant alleles and maps to 467 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000251607.11TRNT1-2012252434aaENSP00000251607.6
 
Protein coding
CCDS2561Q96Q11-1 NM_182916.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000698412.1TRNT1-2277518434aaENSP00000513705.1
 
Protein coding
CCDS2561Q96Q11-1 -GENCODE basicAPPRIS P1
ENST00000698414.1TRNT1-2296343473aaENSP00000513707.1
 
Protein coding
A0A8V8TM71 -GENCODE basic
ENST00000698413.1TRNT1-2285735473aaENSP00000513706.1
 
Protein coding
A0A8V8TM71 -GENCODE basic
ENST00000698411.1TRNT1-226384672aaENSP00000513704.1
 
Protein coding
A0A8V8TN57 -GENCODE basic
ENST00000465998.2TRNT1-209368472aaENSP00000513702.1
 
Protein coding
A0A8V8TN57 -GENCODE basicTSL:4
ENST00000698406.1TRNT1-2212368434aaENSP00000513700.1
 
Protein coding
CCDS2561Q96Q11-1 -GENCODE basicAPPRIS P1
ENST00000280591.10TRNT1-2022180414aaENSP00000280591.6
 
Protein coding
CCDS77691Q96Q11-2 -GENCODE basicTSL:1
ENST00000402675.5TRNT1-205193557aaENSP00000385745.1
 
Protein coding
Q96Q11-3 -GENCODE basicTSL:2
ENST00000339437.11TRNT1-20398757aaENSP00000342985.6
 
Protein coding
Q96Q11-3 -GENCODE basicTSL:1
ENST00000420393.5TRNT1-20785457aaENSP00000400394.1
 
Protein coding
Q96Q11-3 -GENCODE basicTSL:3
ENST00000397779.3TRNT1-204541140aaENSP00000380881.3
 
Protein coding
F8W8C3 -TSL:5CDS 3' incomplete
ENST00000413000.1TRNT1-20648362aaENSP00000388615.1
 
Protein coding
C9JRS7 -TSL:4CDS 3' incomplete
ENST00000698410.1TRNT1-2257501129aaENSP00000513703.1
 
Nonsense mediated decay
A0A494C0A0 --
ENST00000698408.1TRNT1-2232569434aaENSP00000513701.1
 
Nonsense mediated decay
CCDS2561Q96Q11-1 --
ENST00000650839.1TRNT1-2142147213aaENSP00000498970.1
 
Nonsense mediated decay
A0A494C1D4 --
ENST00000651591.1TRNT1-219210665aaENSP00000498240.1
 
Nonsense mediated decay
A0A494BZV5 --
ENST00000652340.1TRNT1-220196779aaENSP00000498624.1
 
Nonsense mediated decay
A0A494C0N8 -CDS 5' incomplete
ENST00000650755.1TRNT1-212193451aaENSP00000499122.1
 
Nonsense mediated decay
A0A494C1P4 --
ENST00000651316.1TRNT1-2171911147aaENSP00000498787.1
 
Nonsense mediated decay
A0A494C0Y2 --
ENST00000650814.1TRNT1-213187471aaENSP00000499120.1
 
Nonsense mediated decay
A0A494C1L4 -CDS 5' incomplete
ENST00000434583.5TRNT1-2081871434aaENSP00000415100.1
 
Nonsense mediated decay
CCDS2561Q96Q11-1 -TSL:2
ENST00000651352.1TRNT1-2181168129aaENSP00000498449.1
 
Nonsense mediated decay
A0A494C0A0 --
ENST00000651093.1TRNT1-2161113206aaENSP00000498942.1
 
Nonsense mediated decay
A0A494C181 --
ENST00000469632.1TRNT1-210867No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000650989.1TRNT1-215799No protein-
 
Protein coding CDS not defined
---
ENST00000698415.1TRNT1-2306597No protein-
 
Retained intron
---
ENST00000698407.1TRNT1-2225865No protein-
 
Retained intron
---
ENST00000698416.1TRNT1-2315500No protein-
 
Retained intron
---
ENST00000698409.1TRNT1-2241259No protein-
 
Retained intron
---
ENST00000482311.1TRNT1-211447No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,252 bps, Translation length: 434 residues

MANE

This MANE Select transcript contains ENSP00000251607 and matches to NM_182916.3 and NP_886552.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96Q11

CCDS

This transcript is a member of the Human CCDS set: CCDS2561

Transcript Support Level (TSL)

TSL:1

Version

ENST00000251607.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.