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Description

coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]

Gene Synonyms

APE, FLJ10392, GIV, GRDN, HkRP1, KIAA1212

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000436346.7CCDC88A-20797511871aaENSP00000410608.1
 
Protein coding
-Q3V6T2-1 NM_001365480.1MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENST00000263630.13CCDC88A-20196991843aaENSP00000263630.8
 
Protein coding
CCDS33203Q3V6T2-2 -GENCODE basicAPPRIS P3TSL:1
ENST00000336838.10CCDC88A-20295051870aaENSP00000338728.6
 
Protein coding
CCDS46288Q3V6T2-3 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000646796.1CCDC88A-25963781796aaENSP00000493703.1
 
Protein coding
CCDS58710Q3V6T2-5 -GENCODE basic
ENST00000413716.7CCDC88A-20495451797aaENSP00000404431.3
 
Protein coding
-A0A2U3TZV9 -GENCODE basicTSL:1
ENST00000643413.1CCDC88A-22588811842aaENSP00000494811.1
 
Protein coding
-Q3V6T2-4 -GENCODE basicAPPRIS ALT1
ENST00000647401.1CCDC88A-26586471604aaENSP00000496148.1
 
Protein coding
-A0A2R8Y7B1 -GENCODE basic
ENST00000642200.1CCDC88A-21469581871aaENSP00000495919.1
 
Protein coding
-Q3V6T2-1 -GENCODE basicAPPRIS ALT1
ENST00000647396.1CCDC88A-26464931135aaENSP00000496591.1
 
Protein coding
-A0A2R8Y820 -CDS 5' incomplete
ENST00000642563.1CCDC88A-21864011108aaENSP00000493994.1
 
Protein coding
-A0A2R8YCU9 -CDS 5' incomplete
ENST00000644512.1CCDC88A-2376171939aaENSP00000495933.1
 
Protein coding
-A0A2R8Y7D4 -CDS 5' incomplete
ENST00000643375.1CCDC88A-2246142930aaENSP00000494876.1
 
Protein coding
-A0A2R8YDS8 -CDS 5' incomplete
ENST00000645072.1CCDC88A-24456231493aaENSP00000494030.1
 
Protein coding
-A0A2R8Y4W8 -GENCODE basic
ENST00000645477.1CCDC88A-24955931494aaENSP00000495712.1
 
Protein coding
-A0A2R8YG73 -GENCODE basic
ENST00000426576.6CCDC88A-20551201202aaENSP00000405080.1
 
Protein coding
-H7C2C6 -TSL:1CDS 5' incomplete
ENST00000444458.5CCDC88A-2084236374aaENSP00000413401.1
 
Protein coding
-H0Y7K3 -TSL:2CDS 5' incomplete
ENST00000645860.1CCDC88A-25441511113aaENSP00000496581.1
 
Protein coding
-A0A2R8Y885 -CDS 5' incomplete
ENST00000471947.2CCDC88A-2113707102aaENSP00000494991.1
 
Protein coding
-A0A2R8Y5R4 -GENCODE basicTSL:1
ENST00000412148.6CCDC88A-2032974888aaENSP00000390012.1
 
Protein coding
-H0Y470 -TSL:1CDS 5' incomplete
ENST00000644630.1CCDC88A-2382971828aaENSP00000495652.1
 
Protein coding
-A0A2R8YG52 -CDS 3' incomplete
ENST00000647291.1CCDC88A-2612671708aaENSP00000494376.1
 
Protein coding
-A0A2R8Y5D7 -CDS 5' incomplete
ENST00000647517.1CCDC88A-2662316526aaENSP00000495183.1
 
Protein coding
-A0A2R8Y6B2 -CDS 3' incomplete
ENST00000456975.1CCDC88A-2092208736aaENSP00000415267.1
 
Protein coding
-H0Y7U8 -TSL:2CDS 5' and 3' incomplete
ENST00000644033.1CCDC88A-2292138495aaENSP00000496040.1
 
Protein coding
-A0A2R8Y7D9 -CDS 3' incomplete
ENST00000647341.1CCDC88A-2621437317aaENSP00000493656.1
 
Protein coding
-A0A2R8YD81 -CDS 3' incomplete
ENST00000647547.1CCDC88A-2671043166aaENSP00000493675.1
 
Protein coding
-A0A2R8Y4C6 -CDS 5' incomplete
ENST00000643440.1CCDC88A-226887296aaENSP00000494401.1
 
Protein coding
-A0A2R8Y4Z5 -CDS 5' and 3' incomplete
ENST00000476903.1CCDC88A-21341955aaENSP00000494021.1
 
Protein coding
-A0A2R8YCW0 -TSL:3CDS 5' incomplete
ENST00000643265.1CCDC88A-2237687974aaENSP00000496310.1
 
Nonsense mediated decay
-A0A2R8YGU1 -CDS 5' incomplete
ENST00000645311.1CCDC88A-24671141406aaENSP00000494054.1
 
Nonsense mediated decay
-A0A2R8Y4X4 --
ENST00000646285.1CCDC88A-256701715aaENSP00000493638.1
 
Nonsense mediated decay
-A0A2R8YCJ0 -CDS 5' incomplete
ENST00000644415.1CCDC88A-2353216299aaENSP00000496555.1
 
Nonsense mediated decay
-A0A2R8Y802 -CDS 5' incomplete
ENST00000647098.1CCDC88A-2602179268aaENSP00000496475.1
 
Nonsense mediated decay
-A0A2R8Y846 --
ENST00000645031.1CCDC88A-2431956268aaENSP00000493668.1
 
Nonsense mediated decay
-A0A2R8Y846 --
ENST00000642890.1CCDC88A-2201875213aaENSP00000494371.1
 
Nonsense mediated decay
-A0A2R8YD99 --
ENST00000645529.1CCDC88A-2521856130aaENSP00000496758.1
 
Nonsense mediated decay
-A0A2R8YFV1 --
ENST00000644193.1CCDC88A-2321732133aaENSP00000495208.1
 
Nonsense mediated decay
-A0A2R8YFK8 --
ENST00000645168.1CCDC88A-245111894aaENSP00000496195.1
 
Nonsense mediated decay
-A0A2R8Y7L3 -CDS 5' incomplete
ENST00000644825.1CCDC88A-24199042aaENSP00000494555.1
 
Nonsense mediated decay
-A0A2R8Y562 -CDS 5' incomplete
ENST00000645484.1CCDC88A-2502097No protein-
 
Processed transcript
----
ENST00000468534.2CCDC88A-2102074No protein-
 
Processed transcript
---TSL:3
ENST00000646324.1CCDC88A-2571931No protein-
 
Processed transcript
----
ENST00000642328.1CCDC88A-216792No protein-
 
Processed transcript
----
ENST00000430086.1CCDC88A-206582No protein-
 
Processed transcript
---TSL:3
ENST00000645571.1CCDC88A-2535499No protein-
 
Retained intron
----
ENST00000645969.1CCDC88A-2554425No protein-
 
Retained intron
----
ENST00000644809.1CCDC88A-2404286No protein-
 
Retained intron
----
ENST00000645485.1CCDC88A-2513864No protein-
 
Retained intron
----
ENST00000644890.1CCDC88A-2423596No protein-
 
Retained intron
----
ENST00000645342.1CCDC88A-2473546No protein-
 
Retained intron
----
ENST00000643873.1CCDC88A-2283360No protein-
 
Retained intron
----
ENST00000644456.1CCDC88A-2363162No protein-
 
Retained intron
----
ENST00000644390.1CCDC88A-2342712No protein-
 
Retained intron
----
ENST00000643634.1CCDC88A-2272636No protein-
 
Retained intron
----
ENST00000645450.1CCDC88A-2482039No protein-
 
Retained intron
----
ENST00000642514.1CCDC88A-2172029No protein-
 
Retained intron
----
ENST00000643103.1CCDC88A-2212008No protein-
 
Retained intron
----
ENST00000643205.1CCDC88A-2221784No protein-
 
Retained intron
----
ENST00000642266.1CCDC88A-2151777No protein-
 
Retained intron
----
ENST00000644127.1CCDC88A-2301586No protein-
 
Retained intron
----
ENST00000647383.1CCDC88A-2631424No protein-
 
Retained intron
----
ENST00000644157.1CCDC88A-2311270No protein-
 
Retained intron
----
ENST00000642784.1CCDC88A-2191270No protein-
 
Retained intron
----
ENST00000644662.1CCDC88A-2391152No protein-
 
Retained intron
----
ENST00000646474.1CCDC88A-2581151No protein-
 
Retained intron
----
ENST00000474059.2CCDC88A-212581No protein-
 
Retained intron
---TSL:5
ENST00000644332.1CCDC88A-233476No protein-
 
Retained intron
----
Description

dystrophin [Source:HGNC Symbol;Acc:HGNC:2928]

Gene Synonyms

BMD, DXS142, DXS164, DXS206, DXS230, DXS239, DXS268, DXS269, DXS270, DXS272, MRX85

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000357033.9DMD-203139923685aaENSP00000354923.3
 
Protein coding
CCDS14233A0A075B6G3 NM_004006.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000378677.6DMD-207139323681aaENSP00000367948.2
 
Protein coding
CCDS55395A0A5H1ZRP8 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000378707.7DMD-21174101225aaENSP00000367979.3
 
Protein coding
CCDS48091A0A5H1ZRQ1 -GENCODE basicTSL:5
ENST00000541735.5DMD-22670801115aaENSP00000444119.1
 
Protein coding
CCDS55394A0A5H1ZRR9 -GENCODE basicTSL:5
ENST00000378723.7DMD-2124645635aaENSP00000367997.3
 
Protein coding
CCDS14231P11532-6 -GENCODE basicTSL:1
ENST00000378702.8DMD-2092617617aaENSP00000367974.4
 
Protein coding
CCDS14234P11532-7 -GENCODE basicTSL:1
ENST00000361471.8DMD-2062224622aaENSP00000354464.4
 
Protein coding
CCDS14232P11532-5 -GENCODE basicTSL:1
ENST00000619831.5DMD-22799032341aaENSP00000479270.2
 
Protein coding
-A0A087WV90 -GENCODE basicTSL:5
ENST00000684130.1DMD-28373611212aaENSP00000508037.1
 
Protein coding
---GENCODE basic
ENST00000359836.5DMD-20573391230aaENSP00000352894.1
 
Protein coding
-A0A5H1ZRP9 -GENCODE basicTSL:5
ENST00000682238.1DMD-25670371133aaENSP00000508124.1
 
Protein coding
---GENCODE basic
ENST00000620040.5DMD-22869411154aaENSP00000478150.2
 
Protein coding
-A0A087WTU7 -GENCODE basicTSL:5
ENST00000358062.6DMD-20467731386aaENSP00000350765.2
 
Protein coding
-H0Y304 -TSL:5CDS 5' incomplete
ENST00000343523.7DMD-2025806970aaENSP00000340057.4
 
Protein coding
-A0A5H1ZRP7 -GENCODE basicTSL:5
ENST00000474231.5DMD-22052091243aaENSP00000417123.1
 
Protein coding
-A0A5H1ZRQ8 -GENCODE basicTSL:5
ENST00000682600.1DMD-2624633604aaENSP00000507640.1
 
Protein coding
---GENCODE basic
ENST00000682322.1DMD-2584567582aaENSP00000507690.1
 
Protein coding
---GENCODE basic
ENST00000680162.2DMD-2374535600aaENSP00000506634.2
 
Protein coding
---GENCODE basic
ENST00000680355.1DMD-2394342507aaENSP00000506257.1
 
Protein coding
---GENCODE basic
ENST00000288447.9DMD-2014024772aaENSP00000288447.4
 
Protein coding
-Q4G0X0 -GENCODE basicTSL:1
ENST00000680768.2DMD-2423889584aaENSP00000506359.2
 
Protein coding
---GENCODE basic
ENST00000679437.1DMD-2313711257aaENSP00000506629.1
 
Protein coding
---GENCODE basic
ENST00000681026.1DMD-2443550257aaENSP00000506689.1
 
Protein coding
---GENCODE basic
ENST00000680557.1DMD-2403367216aaENSP00000505164.1
 
Protein coding
-A0A0S2Z3B2 -GENCODE basic
ENST00000681870.1DMD-250268929aaENSP00000506709.1
 
Protein coding
---GENCODE basic
ENST00000682071.1DMD-2522287524aaENSP00000508133.1
 
Protein coding
---CDS 3' incomplete
ENST00000681153.1DMD-2452210594aaENSP00000505124.1
 
Protein coding
---GENCODE basic
ENST00000378680.6DMD-2081858525aaENSP00000367951.2
 
Protein coding
-P11532-9 -GENCODE basicTSL:1
ENST00000684237.1DMD-2851658491aaENSP00000507277.1
 
Protein coding
---CDS 3' incomplete
ENST00000681334.1DMD-2461296227aaENSP00000506066.1
 
Protein coding
---GENCODE basic
ENST00000681839.1DMD-249996285aaENSP00000505228.1
 
Protein coding
---CDS 3' incomplete
ENST00000679706.1DMD-235873257aaENSP00000506310.1
 
Protein coding
---CDS 5' incomplete
ENST00000378705.3DMD-210714238aaENSP00000367977.3
 
Protein coding
-H0Y3E8 -TSL:5CDS 5' and 3' incomplete
ENST00000493412.1DMD-225616134aaENSP00000417725.1
 
Protein coding
-H0Y864 -TSL:2CDS 5' incomplete
ENST00000447523.1DMD-214375125aaENSP00000395904.1
 
Protein coding
-Q14174 -TSL:1CDS 5' and 3' incomplete
ENST00000420596.5DMD-213303101aaENSP00000399897.1
 
Protein coding
-Q14172 -TSL:5CDS 3' incomplete
ENST00000680216.1DMD-23824231aaENSP00000506462.1
 
Protein coding
---CDS 5' incomplete
ENST00000448370.5DMD-21512341aaENSP00000388559.1
 
Protein coding
-A0A0B4J1W6 -TSL:5CDS 3' incomplete
ENST00000680961.1DMD-2437161816aaENSP00000506386.1
 
Nonsense mediated decay
----
ENST00000679641.1DMD-2334139208aaENSP00000506135.1
 
Nonsense mediated decay
----
ENST00000682924.1DMD-2671975449aaENSP00000508187.1
 
Nonsense mediated decay
----
ENST00000471779.1DMD-21736230aaENSP00000417075.1
 
Nonsense mediated decay
-A0A0C4DH61 -TSL:1CDS 5' incomplete
ENST00000683675.1DMD-2744837No protein-
 
Processed transcript
----
ENST00000681989.1DMD-2514524No protein-
 
Processed transcript
----
ENST00000683709.1DMD-2754470No protein-
 
Processed transcript
----
ENST00000683957.1DMD-2774250No protein-
 
Processed transcript
----
ENST00000682769.1DMD-2643629No protein-
 
Processed transcript
----
ENST00000683509.1DMD-2722867No protein-
 
Processed transcript
----
ENST00000683309.1DMD-2691855No protein-
 
Processed transcript
----
ENST00000488902.5DMD-224771No protein-
 
Processed transcript
---TSL:2
ENST00000634315.1DMD-230655No protein-
 
Processed transcript
---TSL:2
ENST00000481143.2DMD-223621No protein-
 
Processed transcript
---TSL:3
ENST00000463609.2DMD-216618No protein-
 
Processed transcript
---TSL:4
ENST00000472266.1DMD-218380No protein-
 
Processed transcript
---TSL:5
ENST00000472681.1DMD-219371No protein-
 
Processed transcript
---TSL:2
ENST00000480751.1DMD-222234No protein-
 
Processed transcript
---TSL:1
ENST00000679850.1DMD-2368749No protein-
 
Retained intron
----
ENST00000683503.1DMD-2717004No protein-
 
Retained intron
----
ENST00000684342.1DMD-2886233No protein-
 
Retained intron
----
ENST00000684103.1DMD-2825597No protein-
 
Retained intron
----
ENST00000683995.1DMD-2795334No protein-
 
Retained intron
----
ENST00000684350.1DMD-2894852No protein-
 
Retained intron
----
ENST00000682899.1DMD-2664650No protein-
 
Retained intron
----
ENST00000684247.1DMD-2864446No protein-
 
Retained intron
----
ENST00000683117.1DMD-2684022No protein-
 
Retained intron
----
ENST00000684072.1DMD-2813806No protein-
 
Retained intron
----
ENST00000681646.1DMD-2473648No protein-
 
Retained intron
----
ENST00000680701.1DMD-2413513No protein-
 
Retained intron
----
ENST00000679482.1DMD-2323278No protein-
 
Retained intron
----
ENST00000683985.1DMD-2783159No protein-
 
Retained intron
----
ENST00000682207.1DMD-2553157No protein-
 
Retained intron
----
ENST00000683450.1DMD-2703151No protein-
 
Retained intron
----
ENST00000679669.1DMD-2342811No protein-
 
Retained intron
----
ENST00000475732.3DMD-2212668No protein-
 
Retained intron
---TSL:5
ENST00000684056.1DMD-2802625No protein-
 
Retained intron
----
ENST00000682746.1DMD-2632427No protein-
 
Retained intron
----
ENST00000682135.1DMD-2532405No protein-
 
Retained intron
----
ENST00000684165.1DMD-2842341No protein-
 
Retained intron
----
ENST00000684292.1DMD-2872291No protein-
 
Retained intron
----
ENST00000683851.1DMD-2762257No protein-
 
Retained intron
----
ENST00000683658.1DMD-2732000No protein-
 
Retained intron
----
ENST00000682307.1DMD-2571899No protein-
 
Retained intron
----
ENST00000682584.1DMD-2611706No protein-
 
Retained intron
----
ENST00000682870.1DMD-2651632No protein-
 
Retained intron
----
ENST00000684357.1DMD-2901560No protein-
 
Retained intron
----
ENST00000684660.1DMD-2911525No protein-
 
Retained intron
----
ENST00000681654.1DMD-2481400No protein-
 
Retained intron
----
ENST00000682183.1DMD-2541286No protein-
 
Retained intron
----
ENST00000682439.1DMD-2601109No protein-
 
Retained intron
----
ENST00000682437.1DMD-2591056No protein-
 
Retained intron
----
ENST00000634285.1DMD-229671No protein-
 
Retained intron
---TSL:NA
Description

LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]

Gene Synonyms

PINCH-2, PINCH2

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000355119.9LIMS2-2022387341aaENSP00000347240.4
 
Protein coding
CCDS54395Q7Z4I7-1 NM_001161403.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000409455.5LIMS2-2052500336aaENSP00000386383.1
 
Protein coding
CCDS54394Q7Z4I7-3 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000410011.5LIMS2-2082335336aaENSP00000387002.1
 
Protein coding
CCDS54394Q7Z4I7-3 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000409808.6LIMS2-2072315336aaENSP00000386637.2
 
Protein coding
CCDS54394Q7Z4I7-3 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000324938.9LIMS2-2012111365aaENSP00000326888.5
 
Protein coding
CCDS2147Q7Z4I7-2 -GENCODE basicTSL:1
ENST00000545738.6LIMS2-2171730363aaENSP00000443794.2
 
Protein coding
CCDS54396Q7Z4I7-5 -GENCODE basicTSL:5
ENST00000410038.5LIMS2-2091695189aaENSP00000386570.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:2
ENST00000409286.5LIMS2-2041678189aaENSP00000386252.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:2
ENST00000409754.5LIMS2-2061620189aaENSP00000386345.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:1
ENST00000409254.1LIMS2-203867189aaENSP00000386907.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:3
ENST00000426981.5LIMS2-2111409169aaENSP00000397253.1
 
Protein coding
-H0Y592 -TSL:3CDS 5' incomplete
ENST00000413578.5LIMS2-21093060aaENSP00000388611.1
 
Nonsense mediated decay
-F8WEF3 -TSL:3
ENST00000494613.5LIMS2-2161137No protein-
 
Processed transcript
---TSL:2
ENST00000582671.1LIMS2-218531No protein-
 
Processed transcript
---TSL:4
ENST00000469300.6LIMS2-2134807No protein-
 
Retained intron
---TSL:2
ENST00000466410.5LIMS2-2122592No protein-
 
Retained intron
---TSL:2
ENST00000476932.5LIMS2-2142269No protein-
 
Retained intron
---TSL:2
ENST00000484252.5LIMS2-2152099No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,695 bps, Translation length: 189 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS58725

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z4I7

Transcript Support Level (TSL)

TSL:2

Version

ENST00000410038.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x3629ff00)