Human (GRCh38.p14)
Description

jumonji domain containing 6, arginine demethylase and lysine hydroxylase [Source:HGNC Symbol;Acc:HGNC:19355]

Gene Synonyms

KIAA0585, PTDSR, PTDSR1

Location
About this transcript

This transcript has 6 exons, is annotated with 26 domains and features, is associated with 4604 variant alleles and maps to 363 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000397625.9JMJD6-2021621403aaENSP00000380750.4
 
Protein coding
CCDS42384Q6NYC1-1 NM_015167.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000617192.4JMJD6-2085517361aaENSP00000483941.1
 
Protein coding
B2WTI4 -GENCODE basicTSL:5
ENST00000445478.6JMJD6-2035303414aaENSP00000394085.2
 
Protein coding
CCDS42383Q6NYC1-3 -GENCODE basicTSL:1
ENST00000585429.1JMJD6-2051330395aaENSP00000465330.1
 
Protein coding
K7EJU9 -GENCODE basicTSL:5
ENST00000542934.5JMJD6-2041898361aaENSP00000442362.1
 
Nonsense mediated decay
B2WTI4 -TSL:2
ENST00000303996.10JMJD6-2011893335aaENSP00000302916.6
 
Nonsense mediated decay
B2WTI3 -TSL:2
ENST00000591460.1JMJD6-207667No protein-
 
Retained intron
--TSL:2
ENST00000589982.1JMJD6-206467No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,621 bps, Translation length: 403 residues

MANE

This MANE Select transcript contains ENSP00000380750 and matches to NM_015167.3 and NP_055982.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NYC1

CCDS

This transcript is a member of the Human CCDS set: CCDS42384

Transcript Support Level (TSL)

TSL:1

Version

ENST00000397625.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.