Human (GRCh38.p14)
Description

SMG6 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:17809]

Gene Synonyms

C17ORF31, EST1A, KIAA0732, SMG-6

Location
About this transcript

This transcript has 3 exons, is associated with 6058 variant alleles and maps to 47 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000263073.11SMG6-20159741419aaENSP00000263073.5
 
Protein coding
CCDS11016Q86US8-1 NM_017575.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000354901.8SMG6-2023473511aaENSP00000346977.4
 
Protein coding
CCDS58498Q86US8-3 -GENCODE basicTSL:1
ENST00000536871.6SMG6-2031865511aaENSP00000440283.2
 
Protein coding
CCDS58498Q86US8-3 -GENCODE basicTSL:2
ENST00000572369.5SMG6-211689138aaENSP00000465793.1
 
Protein coding
K7EKV2 -TSL:3CDS 3' incomplete
ENST00000575454.1SMG6-218652208aaENSP00000460273.2
 
Protein coding
I3L390 -TSL:3CDS 3' incomplete
ENST00000570659.5SMG6-205592163aaENSP00000460898.1
 
Protein coding
I3L421 -TSL:4CDS 3' incomplete
ENST00000571442.5SMG6-209588164aaENSP00000459164.1
 
Protein coding
I3L1W8 -TSL:4CDS 3' incomplete
ENST00000575663.5SMG6-219574162aaENSP00000458635.1
 
Protein coding
I3L176 -TSL:3CDS 3' incomplete
ENST00000570606.5SMG6-204572123aaENSP00000460191.1
 
Protein coding
I3L355 -TSL:4CDS 3' incomplete
ENST00000575176.5SMG6-216557124aaENSP00000466139.1
 
Protein coding
K7ELM2 -TSL:4CDS 3' incomplete
ENST00000572205.5SMG6-210551115aaENSP00000466951.1
 
Protein coding
K7ENH7 -TSL:4CDS 3' incomplete
ENST00000570668.1SMG6-206547119aaENSP00000460301.1
 
Protein coding
I3L3A9 -TSL:4CDS 3' incomplete
ENST00000573166.5SMG6-2134236No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000570756.5SMG6-2072426No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000576218.5SMG6-220902No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000573827.1SMG6-214601No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000573153.5SMG6-212552No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000575338.1SMG6-217546No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000574501.1SMG6-2152419No protein-
 
Retained intron
--TSL:NA
ENST00000570874.1SMG6-208533No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 3, Coding exons: 0, Transcript length: 546 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000575338.1

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.