Human (GRCh38.p14)
Description

SMG6 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:17809]

Gene Synonyms

C17ORF31, EST1A, KIAA0732, SMG-6

Location
About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 81502 variant alleles and maps to 234 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000263073.11SMG6-20159741419aaENSP00000263073.5
 
Protein coding
CCDS11016Q86US8-1 NM_017575.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000354901.8SMG6-2023473511aaENSP00000346977.4
 
Protein coding
CCDS58498Q86US8-3 -GENCODE basicTSL:1
ENST00000536871.6SMG6-2031865511aaENSP00000440283.2
 
Protein coding
CCDS58498Q86US8-3 -GENCODE basicTSL:2
ENST00000572369.5SMG6-211689138aaENSP00000465793.1
 
Protein coding
K7EKV2 -TSL:3CDS 3' incomplete
ENST00000575454.1SMG6-218652208aaENSP00000460273.2
 
Protein coding
I3L390 -TSL:3CDS 3' incomplete
ENST00000570659.5SMG6-205592163aaENSP00000460898.1
 
Protein coding
I3L421 -TSL:4CDS 3' incomplete
ENST00000571442.5SMG6-209588164aaENSP00000459164.1
 
Protein coding
I3L1W8 -TSL:4CDS 3' incomplete
ENST00000575663.5SMG6-219574162aaENSP00000458635.1
 
Protein coding
I3L176 -TSL:3CDS 3' incomplete
ENST00000570606.5SMG6-204572123aaENSP00000460191.1
 
Protein coding
I3L355 -TSL:4CDS 3' incomplete
ENST00000575176.5SMG6-216557124aaENSP00000466139.1
 
Protein coding
K7ELM2 -TSL:4CDS 3' incomplete
ENST00000572205.5SMG6-210551115aaENSP00000466951.1
 
Protein coding
K7ENH7 -TSL:4CDS 3' incomplete
ENST00000570668.1SMG6-206547119aaENSP00000460301.1
 
Protein coding
I3L3A9 -TSL:4CDS 3' incomplete
ENST00000573166.5SMG6-2134236No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000570756.5SMG6-2072426No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000576218.5SMG6-220902No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000573827.1SMG6-214601No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000573153.5SMG6-212552No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000575338.1SMG6-217546No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000574501.1SMG6-2152419No protein-
 
Retained intron
--TSL:NA
ENST00000570874.1SMG6-208533No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,865 bps, Translation length: 511 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86US8

CCDS

This transcript is a member of the Human CCDS set: CCDS58498

Transcript Support Level (TSL)

TSL:2

Version

ENST00000536871.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.