Human (GRCh38.p14)
Description

histone deacetylase 4 [Source:HGNC Symbol;Acc:HGNC:14063]

Gene Synonyms

BDMR, HA6116, HD4, HDAC-4, HDAC-A, HDACA, KIAA0288

About this transcript

This transcript has 27 exons, is annotated with 33 domains and features, is associated with 171873 variant alleles and maps to 909 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000543185.6HDAC4-21584611089aaENSP00000440481.3
 
Protein coding
CCDS92981A0A7I2SVS4 NM_001378414.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENST00000345617.7HDAC4-20189761084aaENSP00000264606.3
 
Protein coding
CCDS2529P56524-1 -GENCODE basicAPPRIS P4TSL:1
ENST00000430200.1HDAC4-202578175aaENSP00000410551.1
 
Protein coding
H7C397 -TSL:3CDS 5' incomplete
ENST00000454542.5HDAC4-205565162aaENSP00000405226.1
 
Protein coding
C9J481 -TSL:4CDS 3' incomplete
ENST00000446876.1HDAC4-204554123aaENSP00000392912.1
 
Protein coding
C9J0X4 -TSL:4CDS 3' incomplete
ENST00000445704.1HDAC4-203445148aaENSP00000391226.1
 
Protein coding
H7BZT3 -TSL:3CDS 5' and 3' incomplete
ENST00000685474.1HDAC4-217637No protein-
 
Protein coding CDS not defined
---
ENST00000553145.1HDAC4-216552No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000494800.1HDAC4-211451No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000690129.1HDAC4-2186209No protein-
 
Retained intron
---
ENST00000493582.5HDAC4-2103188No protein-
 
Retained intron
--TSL:1
ENST00000463007.5HDAC4-2083158No protein-
 
Retained intron
--TSL:1
ENST00000535493.5HDAC4-2142743No protein-
 
Retained intron
--TSL:2
ENST00000461113.5HDAC4-2071019No protein-
 
Retained intron
--TSL:1
ENST00000496347.1HDAC4-213995No protein-
 
Retained intron
--TSL:3
ENST00000495497.1HDAC4-212849No protein-
 
Retained intron
--TSL:5
ENST00000487617.5HDAC4-209819No protein-
 
Retained intron
--TSL:3
ENST00000460235.1HDAC4-206343No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 27, Coding exons: 26, Transcript length: 8,461 bps, Translation length: 1,089 residues

MANE

This MANE Select transcript contains ENSP00000440481 and matches to NM_001378414.1 and NP_001365343.1

CCDS

This transcript is a member of the Human CCDS set: CCDS92981

Transcript Support Level (TSL)

TSL:5

Version

ENST00000543185.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.