Human (GRCh38.p14)
Description

THUMP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23807]

Gene Synonyms

FLJ20274, TAN1

Location
About this transcript

This transcript has 8 exons, is annotated with 2 domains and features, is associated with 16047 variant alleles and maps to 163 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000396083.7THUMPD1-2024357353aaENSP00000379392.2
 
Protein coding
CCDS10588A0A024R388 Q9NXG2 NM_017736.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000381337.6THUMPD1-2014122353aaENSP00000370741.2
 
Protein coding
CCDS10588A0A024R388 Q9NXG2 -GENCODE basicAPPRIS P1TSL:1
ENST00000636554.1THUMPD1-2062567353aaENSP00000490841.1
 
Nonsense mediated decay
CCDS10588A0A024R388 Q9NXG2 -TSL:5
ENST00000565248.1THUMPD1-2031099145aaENSP00000455033.1
 
Nonsense mediated decay
H3BNW0 -TSL:3
ENST00000570231.1THUMPD1-2051040No protein-
 
Retained intron
--TSL:2
ENST00000569768.1THUMPD1-204635No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 8, Coding exons: 4, Transcript length: 2,567 bps, Translation length: 353 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NXG2

CCDS

This transcript is a member of the Human CCDS set: CCDS10588

Transcript Support Level (TSL)

TSL:5

Version

ENST00000636554.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]