Human (GRCh38.p14)
Description

LIM domain and actin binding 1 [Source:HGNC Symbol;Acc:HGNC:24636]

Gene Synonyms

EPLIN

Location
About this transcript

This transcript has 5 exons, is annotated with 22 domains and features, is associated with 11687 variant alleles and maps to 401 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000341247.9LIMA1-2013680759aaENSP00000340184.4
 
Protein coding
CCDS8802Q9UHB6-1 NM_016357.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENST00000547825.5LIMA1-2033920457aaENSP00000448706.1
 
Protein coding
CCDS58230Q9UHB6-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000394943.7LIMA1-2023669760aaENSP00000378400.3
 
Protein coding
CCDS44877Q9UHB6-4 -GENCODE basicAPPRIS P3TSL:1
ENST00000552783.5LIMA1-2143612600aaENSP00000448779.1
 
Protein coding
CCDS55826Q9UHB6-5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000552823.5LIMA1-2153254599aaENSP00000450266.1
 
Protein coding
Q9UHB6-2 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000552491.5LIMA1-2122652456aaENSP00000448463.1
 
Protein coding
F8VS07 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000552909.5LIMA1-2162162598aaENSP00000450087.1
 
Protein coding
F8VQE1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000551691.5LIMA1-208583130aaENSP00000447975.1
 
Protein coding
F8VTU2 -TSL:3CDS 3' incomplete
ENST00000550592.1LIMA1-205567111aaENSP00000449890.1
 
Protein coding
F8VVQ7 -TSL:4CDS 3' incomplete
ENST00000552720.5LIMA1-2132457388aaENSP00000448411.1
 
Nonsense mediated decay
F8VRN8 -TSL:1
ENST00000552008.5LIMA1-209566No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000552338.5LIMA1-211555No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000550611.1LIMA1-206543No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000549064.1LIMA1-204648No protein-
 
Retained intron
--TSL:2
ENST00000551486.1LIMA1-207587No protein-
 
Retained intron
--TSL:2
ENST00000552045.1LIMA1-210386No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,920 bps, Translation length: 457 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHB6

CCDS

This transcript is a member of the Human CCDS set: CCDS58230

Transcript Support Level (TSL)

TSL:1

Version

ENST00000547825.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.