Human (GRCh38.p14)
Description

vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]

Gene Synonyms

BLTP5D, FLJ10619, KIAA0453

Location
About this transcript

This transcript has 70 exons, is annotated with 36 domains and features, is associated with 117288 variant alleles and maps to 1928 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000620676.6VPS13D-214163574388aaENSP00000478104.1
 
Protein coding
CCDS30588Q5THJ4-1 NM_015378.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000613099.4VPS13D-213162454363aaENSP00000482233.1
 
Protein coding
CCDS30589Q5THJ4-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000011700.10VPS13D-201109693210aaENSP00000011700.6
 
Protein coding
H3BLS7 -TSL:1CDS 5' incomplete
ENST00000543766.2VPS13D-212383844aaENSP00000441122.2
 
Protein coding
F5GX56 -GENCODE basicTSL:2
ENST00000646917.1VPS13D-21953691556aaENSP00000494348.1
 
Nonsense mediated decay
A0A2R8YD87 -CDS 5' incomplete
ENST00000645371.1VPS13D-2172024388aaENSP00000496547.1
 
Nonsense mediated decay
A0A2R8Y876 -CDS 5' incomplete
ENST00000466732.2VPS13D-20337745aaENSP00000473375.1
 
Nonsense mediated decay
R4GMW1 -TSL:5CDS 5' incomplete
ENST00000543710.5VPS13D-2115676No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000487188.1VPS13D-2093990No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000645148.1VPS13D-216577No protein-
 
Protein coding CDS not defined
---
ENST00000469054.1VPS13D-204567No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000489961.1VPS13D-210443No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000476045.5VPS13D-206380No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000481484.1VPS13D-208360No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000460333.5VPS13D-2024910No protein-
 
Retained intron
--TSL:2
ENST00000646411.1VPS13D-2184522No protein-
 
Retained intron
---
ENST00000643711.1VPS13D-215582No protein-
 
Retained intron
---
ENST00000647414.1VPS13D-220554No protein-
 
Retained intron
---
ENST00000476169.1VPS13D-207475No protein-
 
Retained intron
--TSL:3
ENST00000473099.1VPS13D-205461No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 70, Coding exons: 69, Transcript length: 16,357 bps, Translation length: 4,388 residues

MANE

This MANE Select transcript contains ENSP00000478104 and matches to NM_015378.4 and NP_056193.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5THJ4

CCDS

This transcript is a member of the Human CCDS set: CCDS30588

Transcript Support Level (TSL)

TSL:1

Version

ENST00000620676.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

5' standard supported extension [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.