Human (GRCh38.p14)
Description

coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]

Gene Synonyms

DAPLE, HKRP2, KIAA1509, SCA40

Location
About this transcript

This transcript has 30 exons, is annotated with 51 domains and features, is associated with 68679 variant alleles and maps to 880 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000389857.11CCDC88C-20375192028aaENSP00000374507.6
 
Protein coding
CCDS45151Q9P219-1 NM_001080414.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000556726.5CCDC88C-2103617131aaENSP00000452406.1
 
Protein coding
H0YJX5 -TSL:5CDS 5' incomplete
ENST00000553403.1CCDC88C-204165196aaENSP00000451392.1
 
Protein coding
G3V3S0 -GENCODE basicTSL:1
ENST00000389856.9CCDC88C-202164188aaENSP00000374506.5
 
Protein coding
Q0P665 -GENCODE basicTSL:1
ENST00000554165.1CCDC88C-207420No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000554872.5CCDC88C-2081165No protein-
 
Retained intron
--TSL:4
ENST00000334448.5CCDC88C-2011055No protein-
 
Retained intron
--TSL:1
ENST00000557455.1CCDC88C-212811No protein-
 
Retained intron
--TSL:3
ENST00000555995.1CCDC88C-209689No protein-
 
Retained intron
--TSL:3
ENST00000556767.1CCDC88C-211676No protein-
 
Retained intron
--TSL:2
ENST00000553437.1CCDC88C-205550No protein-
 
Retained intron
--TSL:2
ENST00000554051.1CCDC88C-206478No protein-
 
Retained intron
--TSL:3
ENST00000557507.1CCDC88C-213429No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 30, Coding exons: 30, Transcript length: 7,519 bps, Translation length: 2,028 residues

MANE

This MANE Select transcript contains ENSP00000374507 and matches to NM_001080414.4 and NP_001073883.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P219

CCDS

This transcript is a member of the Human CCDS set: CCDS45151

Transcript Support Level (TSL)

TSL:5

Version

ENST00000389857.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.