Human (GRCh38.p14)
Description

polypyrimidine tract binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9583]

Gene Synonyms

HNRNP-I, HNRPI, PPTB, PTB, PTB-1, PTB2, PTB3, PTB4

Location
About this transcript

This transcript has 9 exons, is associated with 5353 variant alleles and maps to 306 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000356948.11PTBP1-2033206557aaENSP00000349428.4
 
Protein coding
CCDS42456P26599-3 NM_002819.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000635647.1PTBP1-2203691588aaENSP00000489604.1
 
Protein coding
A0A0U1RRM4 -GENCODE basicTSL:5
ENST00000679114.1PTBP1-2243233559aaENSP00000504829.1
 
Protein coding
CCDS92475A0A7I2V621 -GENCODE basic
ENST00000394601.8PTBP1-2043185550aaENSP00000408096.1
 
Protein coding
CCDS45892P26599-2 -GENCODE basicTSL:1
ENST00000349038.8PTBP1-2013155531aaENSP00000014112.5
 
Protein coding
CCDS32859P26599-1 -GENCODE basicTSL:1
ENST00000350092.8PTBP1-2023069527aaENSP00000342332.5
 
Protein coding
A6NLN1 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000627714.2PTBP1-2192201197aaENSP00000486218.1
 
Protein coding
A0A0D9SF20 -GENCODE basicTSL:5
ENST00000585956.5PTBP1-208767256aaENSP00000465451.1
 
Protein coding
K7EK45 -TSL:3CDS 5' and 3' incomplete
ENST00000589575.5PTBP1-213749237aaENSP00000465652.2
 
Protein coding
K7EKJ7 -TSL:3CDS 3' incomplete
ENST00000586481.5PTBP1-209578149aaENSP00000468565.3
 
Protein coding
K7ES59 -TSL:3CDS 3' incomplete
ENST00000587191.3PTBP1-21235781aaENSP00000478974.1
 
Protein coding
A0A087WUW5 -TSL:5CDS 3' incomplete
ENST00000585535.2PTBP1-205314105aaENSP00000466250.2
 
Protein coding
K7ELW5 -TSL:3CDS 5' and 3' incomplete
ENST00000676227.1PTBP1-2213275339aaENSP00000501551.1
 
Nonsense mediated decay
A0A6Q8PEX4 --
ENST00000677277.1PTBP1-2223194313aaENSP00000504032.1
 
Nonsense mediated decay
A0A7I2V4H6 --
ENST00000621737.4PTBP1-2181125227aaENSP00000478414.1
 
Nonsense mediated decay
A0A087WU68 -TSL:5CDS 5' incomplete
ENST00000585932.5PTBP1-2071030115aaENSP00000478097.1
 
Nonsense mediated decay
A0A087WTS6 -TSL:3CDS 5' incomplete
ENST00000586944.5PTBP1-2104661No protein-
 
Retained intron
--TSL:2
ENST00000592804.2PTBP1-2171556No protein-
 
Retained intron
--TSL:2
ENST00000592113.5PTBP1-2161548No protein-
 
Retained intron
--TSL:5
ENST00000585856.2PTBP1-2061217No protein-
 
Retained intron
--TSL:2
ENST00000677717.1PTBP1-223723No protein-
 
Retained intron
---
ENST00000589883.1PTBP1-214683No protein-
 
Retained intron
--TSL:3
ENST00000590887.5PTBP1-215642No protein-
 
Retained intron
--TSL:3
ENST00000587136.1PTBP1-211583No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 9, Coding exons: 6, Transcript length: 1,125 bps, Translation length: 227 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENST00000621737.4

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.