Human (GRCh38.p14)
Description

VPS41 subunit of HOPS complex [Source:HGNC Symbol;Acc:HGNC:12713]

Gene Synonyms

HVSP41

Location
About this transcript

This transcript has 29 exons, is annotated with 17 domains and features, is associated with 73665 variant alleles and maps to 1018 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000310301.9VPS41-2025854854aaENSP00000309457.4
 
Protein coding
CCDS5457P49754-1 NM_014396.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000395969.6VPS41-2033181829aaENSP00000379297.2
 
Protein coding
CCDS5458P49754-3 -GENCODE basicTSL:5
ENST00000413141.5VPS41-204575156aaENSP00000412974.1
 
Protein coding
C9JU58 -TSL:4CDS 3' incomplete
ENST00000414632.5VPS41-205548177aaENSP00000411919.1
 
Protein coding
C9J3F8 -TSL:4CDS 3' incomplete
ENST00000418457.6VPS41-206532104aaENSP00000407835.2
 
Protein coding
C9JZ11 -TSL:5CDS 3' incomplete
ENST00000457055.1VPS41-20946573aaENSP00000398584.1
 
Protein coding
C9J2U9 -TSL:4CDS 3' incomplete
ENST00000439468.1VPS41-207354109aaENSP00000395410.1
 
Protein coding
H7C0K2 -TSL:5CDS 5' incomplete
ENST00000265745.13VPS41-201769209aaENSP00000265745.9
 
Nonsense mediated decay
H7BXH3 -TSL:2
ENST00000448833.5VPS41-208711150aaENSP00000391980.1
 
Nonsense mediated decay
H7BZX6 -TSL:1CDS 5' incomplete
ENST00000466017.1VPS41-211591No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000485955.1VPS41-213571No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000482217.1VPS41-212951No protein-
 
Retained intron
--TSL:5
ENST00000490924.1VPS41-214496No protein-
 
Retained intron
--TSL:2
ENST00000462429.1VPS41-210347No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 29, Coding exons: 29, Transcript length: 5,854 bps, Translation length: 854 residues

MANE

This MANE Select transcript contains ENSP00000309457 and matches to NM_014396.4 and NP_055211.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49754

CCDS

This transcript is a member of the Human CCDS set: CCDS5457

Transcript Support Level (TSL)

TSL:1

Version

ENST00000310301.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.