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Description

tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]

Gene Synonyms

TM2, Tm3, Tpm-1, alpha-TM

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Tpm1-209ENSMUST00000113690.82890245aaENSMUSP00000109320.2
 
Protein coding
CCDS52842G5E8R0 GENCODE basicTSL:3
Tpm1-216ENSMUST00000113707.91898284aaENSMUSP00000109337.3
 
Protein coding
CCDS23311P58771-2 GENCODE basicAPPRIS P3TSL:1
Tpm1-215ENSMUST00000113705.81759284aaENSMUSP00000109335.2
 
Protein coding
CCDS52848B7ZNL3 GENCODE basicTSL:1
Tpm1-213ENSMUST00000113697.81742284aaENSMUSP00000109327.2
 
Protein coding
CCDS52846E9Q450 GENCODE basicTSL:2
Tpm1-212ENSMUST00000113696.81714248aaENSMUSP00000109326.2
 
Protein coding
CCDS52843G5E8R2 GENCODE basicTSL:2
Tpm1-211ENSMUST00000113695.81607248aaENSMUSP00000109325.2
 
Protein coding
CCDS52841G5E8R1 GENCODE basicTSL:3
Tpm1-203ENSMUST00000050905.161259284aaENSMUSP00000051888.10
 
Protein coding
CCDS52847Q8BP43 GENCODE basicAPPRIS ALT1TSL:1
Tpm1-205ENSMUST00000113685.101208284aaENSMUSP00000109315.4
 
Protein coding
CCDS52845P58771-1 GENCODE basicAPPRIS ALT1TSL:1
Tpm1-210ENSMUST00000113693.81054281aaENSMUSP00000109323.2
 
Protein coding
CCDS52844E9Q452 GENCODE basicTSL:5
Tpm1-202ENSMUST00000034928.121824326aaENSMUSP00000034928.5
 
Protein coding
-F8WID5 GENCODE basicTSL:5
Tpm1-201ENSMUST00000030185.51797284aaENSMUSP00000030185.5
 
Protein coding
-Q8BSH3 GENCODE basicAPPRIS ALT1TSL:2
Tpm1-214ENSMUST00000113701.81677284aaENSMUSP00000109331.2
 
Protein coding
-E9Q448 GENCODE basicTSL:5
Tpm1-206ENSMUST00000113686.8998251aaENSMUSP00000109316.2
 
Protein coding
-E9Q455 GENCODE basicTSL:5
Tpm1-207ENSMUST00000113687.8962287aaENSMUSP00000109317.2
 
Protein coding
-E9Q454 GENCODE basicTSL:5
Tpm1-208ENSMUST00000113689.8904245aaENSMUSP00000109319.2
 
Protein coding
-E9Q453 GENCODE basicTSL:5
Tpm1-204ENSMUST00000113684.8887248aaENSMUSP00000109314.2
 
Protein coding
-E9Q456 GENCODE basicTSL:5
Tpm1-218ENSMUST00000129733.81544157aaENSMUSP00000138784.2
 
Nonsense mediated decay
-S4R2U0 TSL:5
Tpm1-220ENSMUST00000139046.8141949aaENSMUSP00000138514.2
 
Nonsense mediated decay
-S4R261 TSL:5
Tpm1-221ENSMUST00000156899.21274No protein-
 
Processed transcript
--TSL:1
Tpm1-219ENSMUST00000131279.2649No protein-
 
Processed transcript
--TSL:2
Tpm1-217ENSMUST00000129466.81123No protein-
 
Retained intron
--TSL:2
Description

LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]

Gene Synonyms

PINCH-2, PINCH2

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
LIMS2-202ENST00000355119.92387341aaENSP00000347240.4
 
Protein coding
CCDS54395Q7Z4I7-1 NM_001161403.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
LIMS2-205ENST00000409455.52500336aaENSP00000386383.1
 
Protein coding
CCDS54394Q7Z4I7-3 -GENCODE basicAPPRIS P4TSL:1
LIMS2-208ENST00000410011.52335336aaENSP00000387002.1
 
Protein coding
CCDS54394Q7Z4I7-3 -GENCODE basicAPPRIS P4TSL:1
LIMS2-207ENST00000409808.62315336aaENSP00000386637.2
 
Protein coding
CCDS54394Q7Z4I7-3 -GENCODE basicAPPRIS P4TSL:5
LIMS2-201ENST00000324938.92111365aaENSP00000326888.5
 
Protein coding
CCDS2147Q7Z4I7-2 -GENCODE basicTSL:1
LIMS2-217ENST00000545738.61730363aaENSP00000443794.2
 
Protein coding
CCDS54396Q7Z4I7-5 -GENCODE basicTSL:5
LIMS2-209ENST00000410038.51695189aaENSP00000386570.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:2
LIMS2-204ENST00000409286.51678189aaENSP00000386252.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:2
LIMS2-206ENST00000409754.51620189aaENSP00000386345.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:1
LIMS2-203ENST00000409254.1867189aaENSP00000386907.1
 
Protein coding
CCDS58725Q7Z4I7-4 -GENCODE basicTSL:3
LIMS2-211ENST00000426981.51409169aaENSP00000397253.1
 
Protein coding
-H0Y592 -TSL:3CDS 5' incomplete
LIMS2-210ENST00000413578.593060aaENSP00000388611.1
 
Nonsense mediated decay
-F8WEF3 -TSL:3
LIMS2-216ENST00000494613.51137No protein-
 
Processed transcript
---TSL:2
LIMS2-218ENST00000582671.1531No protein-
 
Processed transcript
---TSL:4
LIMS2-213ENST00000469300.64807No protein-
 
Retained intron
---TSL:2
LIMS2-212ENST00000466410.52592No protein-
 
Retained intron
---TSL:2
LIMS2-214ENST00000476932.52269No protein-
 
Retained intron
---TSL:2
LIMS2-215ENST00000484252.52099No protein-
 
Retained intron
---TSL:2
Description

RNA binding fox-1 homolog 3 [Source:HGNC Symbol;Acc:HGNC:27097]

Gene Synonyms

FOX-3, HRNBP3, NeuN

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
RBFOX3-203ENST00000580155.51519312aaENSP00000463653.1
 
Protein coding
CCDS45805A6NFN3-1 -Ensembl CanonicalGENCODE basicAPPRIS P2TSL:2
RBFOX3-211ENST00000583458.52934358aaENSP00000464186.1
 
Protein coding
-J3QRF4 -GENCODE basicAPPRIS ALT2TSL:5
RBFOX3-213ENST00000648001.12461314aaENSP00000497797.1
 
Protein coding
-A0A3B3ITL7 -CDS 5' incomplete
RBFOX3-212ENST00000584778.51547325aaENSP00000462007.1
 
Protein coding
-A6NFN3-2 -GENCODE basicAPPRIS ALT2TSL:5
RBFOX3-206ENST00000582043.51143328aaENSP00000463964.1
 
Protein coding
-J3QQZ2 -GENCODE basicTSL:5
RBFOX3-209ENST00000582880.687775aaENSP00000465367.1
 
Protein coding
-K7EJX6 -TSL:3CDS 5' incomplete
RBFOX3-210ENST00000582894.5611131aaENSP00000468693.1
 
Protein coding
-K7ESF7 -TSL:3CDS 5' incomplete
RBFOX3-204ENST00000580508.126052aaENSP00000467872.1
 
Protein coding
-K7EQK7 -TSL:2CDS 3' incomplete
RBFOX3-207ENST00000582139.11544aaENSP00000464946.1
 
Protein coding
---TSL:3CDS 3' incomplete
RBFOX3-201ENST00000578887.12694No protein-
 
Processed transcript
---TSL:2
RBFOX3-208ENST00000582344.1321No protein-
 
Processed transcript
---TSL:3
RBFOX3-202ENST00000578998.13072No protein-
 
Retained intron
---TSL:2
RBFOX3-205ENST00000581393.51201No protein-
 
Retained intron
---TSL:2
Description

CUGBP, Elav-like family member 2 [Source:MGI Symbol;Acc:MGI:1338822]

Gene Synonyms

B230345P09Rik, Cugbp2, ETR-3, Napor-2

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Celf2-214ENSMUST00000170438.88856478aaENSMUSP00000130829.2
 
Protein coding
CCDS50493E9QA47 GENCODE basicTSL:5
Celf2-204ENSMUST00000114924.108738526aaENSMUSP00000110574.4
 
Protein coding
CCDS50494Q9Z0H4-9 GENCODE basicAPPRIS P4TSL:1
Celf2-201ENSMUST00000002176.137718484aaENSMUSP00000002176.6
 
Protein coding
CCDS50491Q9Z0H4-7 GENCODE basicAPPRIS ALT1TSL:1
Celf2-202ENSMUST00000100429.117491484aaENSMUSP00000097996.5
 
Protein coding
CCDS50491Q9Z0H4-7 GENCODE basicAPPRIS ALT1TSL:5
Celf2-206ENSMUST00000114934.115470526aaENSMUSP00000110584.4
 
Protein coding
CCDS50494Q9Z0H4-9 GENCODE basicAPPRIS P4TSL:1
Celf2-226ENSMUST00000183209.83852472aaENSMUSP00000138355.2
 
Protein coding
CCDS59632S4R1S7 GENCODE basicTSL:1
Celf2-221ENSMUST00000182706.82525520aaENSMUSP00000138764.2
 
Protein coding
CCDS59633Q9Z0H4-2 GENCODE basicAPPRIS ALT1TSL:1
Celf2-211ENSMUST00000142941.82338490aaENSMUSP00000120459.3
 
Protein coding
CCDS50492Q9Z0H4-4 GENCODE basicAPPRIS ALT1TSL:5
Celf2-213ENSMUST00000150624.92332488aaENSMUSP00000138297.2
 
Protein coding
CCDS84468Q9Z0H4-5 GENCODE basicAPPRIS ALT1TSL:1
Celf2-224ENSMUST00000182879.82223440aaENSMUSP00000138359.2
 
Protein coding
CCDS79729A0A0R4J2B0 GENCODE basicTSL:1
Celf2-205ENSMUST00000114927.91721488aaENSMUSP00000110577.2
 
Protein coding
CCDS84468Q9Z0H4-5 GENCODE basicAPPRIS ALT1TSL:5
Celf2-223ENSMUST00000182851.83587508aaENSMUSP00000138363.2
 
Protein coding
-Q9Z0H4-1 GENCODE basicTSL:1
Celf2-225ENSMUST00000183091.82177460aaENSMUSP00000138795.2
 
Protein coding
-S4R2U7 GENCODE basicTSL:5
Celf2-217ENSMUST00000182404.81024276aaENSMUSP00000138769.2
 
Protein coding
-S4R2S7 TSL:5CDS 3' incomplete
Celf2-209ENSMUST00000137733.9630134aaENSMUSP00000138694.2
 
Protein coding
-S4R2L5 TSL:3CDS 3' incomplete
Celf2-203ENSMUST00000114923.3529159aaENSMUSP00000110573.3
 
Protein coding
-A3KGT0 GENCODE basicTSL:3
Celf2-207ENSMUST00000123142.340292aaENSMUSP00000138666.2
 
Protein coding
-S4R2J2 TSL:5CDS 3' incomplete
Celf2-220ENSMUST00000182657.233146aaENSMUSP00000138785.2
 
Protein coding
-S4R2U1 TSL:1CDS 3' incomplete
Celf2-228ENSMUST00000183984.81996443aaENSMUSP00000138974.2
 
Nonsense mediated decay
-V9GX43 TSL:5CDS 5' incomplete
Celf2-222ENSMUST00000182749.21967No protein-
 
Processed transcript
--TSL:5
Celf2-216ENSMUST00000182355.21240No protein-
 
Processed transcript
--TSL:1
Celf2-210ENSMUST00000138347.9923No protein-
 
Processed transcript
--TSL:5
Celf2-215ENSMUST00000182037.2769No protein-
 
Processed transcript
--TSL:3
Celf2-212ENSMUST00000148321.9405No protein-
 
Processed transcript
--TSL:5
Celf2-219ENSMUST00000182560.84802No protein-
 
Retained intron
--TSL:2
Celf2-227ENSMUST00000183269.84798No protein-
 
Retained intron
--TSL:2
Celf2-218ENSMUST00000182523.24143No protein-
 
Retained intron
--TSL:2
Celf2-208ENSMUST00000126742.22075No protein-
 
Retained intron
--TSL:2
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZp761J1324, NCRNA00043, SOX2OT

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
SOX2-OT-294ENST00000660576.14101No protein-
 
lncRNA
--Ensembl Canonical
SOX2-OT-292ENST00000656613.14289No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-302ENST00000670501.14282No protein-
 
lncRNA
---
SOX2-OT-298ENST00000665187.14263No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-303ENST00000671456.14240No protein-
 
lncRNA
---
SOX2-OT-293ENST00000657986.14162No protein-
 
lncRNA
---
SOX2-OT-282ENST00000646698.14109No protein-
 
lncRNA
---
SOX2-OT-234ENST00000600801.74085No protein-
 
lncRNA
--TSL:5
SOX2-OT-295ENST00000661842.14077No protein-
 
lncRNA
---
SOX2-OT-291ENST00000654649.14032No protein-
 
lncRNA
---
SOX2-OT-225ENST00000596250.73985No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-218ENST00000498731.63964No protein-
 
lncRNA
--TSL:1
SOX2-OT-275ENST00000645583.23870No protein-
 
lncRNA
---
SOX2-OT-284ENST00000646841.23868No protein-
 
lncRNA
---
SOX2-OT-290ENST00000654538.13844No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-296ENST00000665033.13529No protein-
 
lncRNA
---
SOX2-OT-297ENST00000665112.13462No protein-
 
lncRNA
---
SOX2-OT-287ENST00000647055.13274No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-207ENST00000476964.63226No protein-
 
lncRNA
--GENCODE basicTSL:1
SOX2-OT-286ENST00000647034.12920No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-214ENST00000493116.62779No protein-
 
lncRNA
--TSL:4
SOX2-OT-267ENST00000643236.22454No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-299ENST00000665485.12297No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-263ENST00000642685.12276No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-260ENST00000642301.22271No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-213ENST00000492337.62184No protein-
 
lncRNA
--TSL:2
SOX2-OT-300ENST00000667332.12112No protein-
 
lncRNA
---
SOX2-OT-279ENST00000646296.22094No protein-
 
lncRNA
---
SOX2-OT-262ENST00000642652.22042No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-285ENST00000646949.21980No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-269ENST00000643769.11967No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-272ENST00000644582.11884No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-203ENST00000466034.71772No protein-
 
lncRNA
--TSL:1
SOX2-OT-281ENST00000646683.11766No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-271ENST00000644358.11703No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-248ENST00000628810.21675No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-268ENST00000643667.11622No protein-
 
lncRNA
---
SOX2-OT-274ENST00000645423.21583No protein-
 
lncRNA
---
SOX2-OT-259ENST00000642218.11500No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-265ENST00000642922.11468No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-264ENST00000642823.11444No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-280ENST00000646508.11390No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-226ENST00000597347.51342No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-261ENST00000642429.11279No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-273ENST00000644732.11242No protein-
 
lncRNA
---
SOX2-OT-215ENST00000493521.51239No protein-
 
lncRNA
--GENCODE basicTSL:3
SOX2-OT-289ENST00000647552.11238No protein-
 
lncRNA
---
SOX2-OT-276ENST00000645960.11199No protein-
 
lncRNA
---
SOX2-OT-209ENST00000485035.31162No protein-
 
lncRNA
--GENCODE basicTSL:4
SOX2-OT-270ENST00000644304.11115No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-266ENST00000643131.21097No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-288ENST00000647179.11068No protein-
 
lncRNA
---
SOX2-OT-212ENST00000491282.61040No protein-
 
lncRNA
--TSL:1
SOX2-OT-255ENST00000630482.21012No protein-
 
lncRNA
--TSL:5
SOX2-OT-283ENST00000646712.1989No protein-
 
lncRNA
---
SOX2-OT-206ENST00000476125.5979No protein-
 
lncRNA
--TSL:3
SOX2-OT-258ENST00000631025.2954No protein-
 
lncRNA
--TSL:5
SOX2-OT-256ENST00000630553.1905No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-208ENST00000477928.1902No protein-
 
lncRNA
--TSL:2
SOX2-OT-242ENST00000627530.3873No protein-
 
lncRNA
--TSL:5
SOX2-OT-228ENST00000597828.5864No protein-
 
lncRNA
--TSL:5
SOX2-OT-222ENST00000595084.3850No protein-
 
lncRNA
--TSL:5
SOX2-OT-244ENST00000628211.2847No protein-
 
lncRNA
--TSL:5
SOX2-OT-240ENST00000626948.2836No protein-
 
lncRNA
--TSL:5
SOX2-OT-231ENST00000599082.2836No protein-
 
lncRNA
--TSL:5
SOX2-OT-247ENST00000628496.3798No protein-
 
lncRNA
--TSL:5
SOX2-OT-278ENST00000646056.1796No protein-
 
lncRNA
---
SOX2-OT-232ENST00000600386.6789No protein-
 
lncRNA
--TSL:5
SOX2-OT-241ENST00000627501.3772No protein-
 
lncRNA
--TSL:5
SOX2-OT-233ENST00000600778.3762No protein-
 
lncRNA
--TSL:5
SOX2-OT-249ENST00000629112.3759No protein-
 
lncRNA
--TSL:5
SOX2-OT-220ENST00000593549.6753No protein-
 
lncRNA
--TSL:5
SOX2-OT-210ENST00000487240.3751No protein-
 
lncRNA
--TSL:5
SOX2-OT-257ENST00000630887.3745No protein-
 
lncRNA
--TSL:5
SOX2-OT-245ENST00000628343.3743No protein-
 
lncRNA
--TSL:5
SOX2-OT-239ENST00000626802.2737No protein-
 
lncRNA
--TSL:5
SOX2-OT-224ENST00000595313.5716No protein-
 
lncRNA
--TSL:5
SOX2-OT-243ENST00000627738.1692No protein-
 
lncRNA
--TSL:5
SOX2-OT-252ENST00000629781.3690No protein-
 
lncRNA
--TSL:5
SOX2-OT-253ENST00000629830.3677No protein-
 
lncRNA
--TSL:5
SOX2-OT-221ENST00000594942.5675No protein-
 
lncRNA
--TSL:5
SOX2-OT-238ENST00000626619.2660No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-301ENST00000668295.1654No protein-
 
lncRNA
---
SOX2-OT-254ENST00000630150.2649No protein-
 
lncRNA
--TSL:5
SOX2-OT-227ENST00000597651.6626No protein-
 
lncRNA
--TSL:5
SOX2-OT-237ENST00000626299.3619No protein-
 
lncRNA
--TSL:5
SOX2-OT-201ENST00000460739.5609No protein-
 
lncRNA
--TSL:4
SOX2-OT-223ENST00000595287.1581No protein-
 
lncRNA
--TSL:5
SOX2-OT-216ENST00000497122.5578No protein-
 
lncRNA
--TSL:4
SOX2-OT-250ENST00000629273.2575No protein-
 
lncRNA
--TSL:5
SOX2-OT-251ENST00000629552.2572No protein-
 
lncRNA
--TSL:5
SOX2-OT-202ENST00000461063.6566No protein-
 
lncRNA
--TSL:3
SOX2-OT-204ENST00000469278.5561No protein-
 
lncRNA
--TSL:4
SOX2-OT-217ENST00000498226.5560No protein-
 
lncRNA
--TSL:4
SOX2-OT-229ENST00000598474.4512No protein-
 
lncRNA
--TSL:5
SOX2-OT-236ENST00000625581.2495No protein-
 
lncRNA
--TSL:5
SOX2-OT-235ENST00000600962.6469No protein-
 
lncRNA
--TSL:5
SOX2-OT-219ENST00000593330.1468No protein-
 
lncRNA
--TSL:3
SOX2-OT-205ENST00000472856.1454No protein-
 
lncRNA
--TSL:2
SOX2-OT-246ENST00000628347.1445No protein-
 
lncRNA
--TSL:5
SOX2-OT-277ENST00000645983.1392No protein-
 
lncRNA
---
SOX2-OT-211ENST00000490005.2383No protein-
 
lncRNA
--TSL:2
SOX2-OT-230ENST00000598867.1348No protein-
 
lncRNA
--TSL:5
Description

ubiquitously transcribed tetratricopeptide repeat containing, Y-linked [Source:MGI Symbol;Acc:MGI:894810]

Gene Synonyms

Hydb

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Uty-201ENSMUST00000069309.1452081212aaENSMUSP00000070012.8
 
Protein coding
CCDS41216G3X9F2 GENCODE basicAPPRIS P3TSL:1
Uty-204ENSMUST00000139365.846841211aaENSMUSP00000114752.2
 
Protein coding
CCDS85834E9PWW8 GENCODE basicAPPRIS ALT2TSL:1
Uty-208ENSMUST00000154004.842671149aaENSMUSP00000114910.2
 
Protein coding
CCDS85833Q3UQE8 GENCODE basicAPPRIS ALT2TSL:1
Uty-205ENSMUST00000143286.850831111aaENSMUSP00000115113.2
 
Protein coding
-E9Q504 GENCODE basicAPPRIS ALT2TSL:1
Uty-203ENSMUST00000137048.82012646aaENSMUSP00000119406.2
 
Protein coding
-D3Z2A3 TSL:1CDS 3' incomplete
Uty-210ENSMUST00000154666.85185144aaENSMUSP00000122818.2
 
Nonsense mediated decay
-D6RFT4 TSL:1
Uty-206ENSMUST00000143958.8290378aaENSMUSP00000120069.2
 
Nonsense mediated decay
-D6RJL0 TSL:5
Uty-207ENSMUST00000150715.2501100aaENSMUSP00000116372.2
 
Nonsense mediated decay
-F7BBC1 TSL:3CDS 5' incomplete
Uty-211ENSMUST00000157073.82148No protein-
 
Processed transcript
--TSL:1
Uty-212ENSMUST00000185837.22368No protein-
 
Retained intron
--TSL:NA
Uty-209ENSMUST00000154527.2667No protein-
 
Retained intron
--TSL:3
Uty-202ENSMUST00000133976.2587No protein-
 
Retained intron
--TSL:5
Description

CAP-GLY domain containing linker protein 1 [Source:MGI Symbol;Acc:MGI:1928401]

Gene Synonyms

1110007I12Rik, 4631429H07Rik, CLIP-170, Clip 170, Clip50, Rsn, cytoplasmic linker protein 50, restin

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Clip1-205ENSMUST00000111566.961331391aaENSMUSP00000107192.3
 
Protein coding
CCDS19667Q922J3-1 GENCODE basicAPPRIS P3TSL:1
Clip1-204ENSMUST00000111564.856091315aaENSMUSP00000107190.2
 
Protein coding
CCDS71663Q922J3-2 GENCODE basicAPPRIS ALT2TSL:1
Clip1-202ENSMUST00000063905.1245891320aaENSMUSP00000068241.6
 
Protein coding
CCDS84958D3Z3M7 GENCODE basicAPPRIS ALT2TSL:5
Clip1-203ENSMUST00000111561.858831426aaENSMUSP00000107186.2
 
Protein coding
-D3Z2Z1 GENCODE basicAPPRIS ALT2TSL:5
Clip1-208ENSMUST00000137363.846701066aaENSMUSP00000121425.2
 
Protein coding
-F6RCU2 TSL:5CDS 5' incomplete
Clip1-201ENSMUST00000031382.1443871437aaENSMUSP00000031382.8
 
Protein coding
-F8WIA1 GENCODE basicAPPRIS ALT2TSL:5
Clip1-213ENSMUST00000154672.235441182aaENSMUSP00000122064.2
 
Protein coding
-F7CB97 TSL:5CDS 5' and 3' incomplete
Clip1-211ENSMUST00000149410.22669840aaENSMUSP00000115965.2
 
Protein coding
-Q8C0S5 TSL:1CDS 3' incomplete
Clip1-210ENSMUST00000144121.22880172aaENSMUSP00000119641.2
 
Nonsense mediated decay
-F6RAY2 TSL:5CDS 5' incomplete
Clip1-214ENSMUST00000198833.2596No protein-
 
Processed transcript
--TSL:3
Clip1-215ENSMUST00000199018.22692No protein-
 
Retained intron
--TSL:NA
Clip1-206ENSMUST00000125340.82394No protein-
 
Retained intron
--TSL:2
Clip1-209ENSMUST00000137602.81505No protein-
 
Retained intron
--TSL:5
Clip1-212ENSMUST00000154432.2898No protein-
 
Retained intron
--TSL:2
Clip1-207ENSMUST00000133545.8694No protein-
 
Retained intron
--TSL:3
Description

ELOVL fatty acid elongase 1 [Source:HGNC Symbol;Acc:HGNC:14418]

Gene Synonyms

Ssc1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ELOVL1-201ENST00000372458.81466279aaENSP00000361536.3
 
Protein coding
CCDS485Q9BW60-1 NM_022821.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ELOVL1-216ENST00000621943.41625279aaENSP00000477602.1
 
Protein coding
CCDS485Q9BW60-1 -GENCODE basicAPPRIS P1TSL:2
ELOVL1-202ENST00000413844.31451252aaENSP00000416024.2
 
Protein coding
CCDS57987Q9BW60-2 -GENCODE basicTSL:2
ELOVL1-206ENST00000470769.51215No protein-
 
Processed transcript
---TSL:2
ELOVL1-203ENST00000464204.51034No protein-
 
Processed transcript
---TSL:1
ELOVL1-211ENST00000482302.5984No protein-
 
Processed transcript
---TSL:3
ELOVL1-214ENST00000497050.5973No protein-
 
Processed transcript
---TSL:2
ELOVL1-207ENST00000470968.6867No protein-
 
Processed transcript
---TSL:5
ELOVL1-215ENST00000497569.5830No protein-
 
Processed transcript
---TSL:3
ELOVL1-212ENST00000487209.5828No protein-
 
Processed transcript
---TSL:2
ELOVL1-205ENST00000468865.6797No protein-
 
Processed transcript
---TSL:3
ELOVL1-213ENST00000496932.1779No protein-
 
Processed transcript
---TSL:3
ELOVL1-204ENST00000465321.5726No protein-
 
Processed transcript
---TSL:5
ELOVL1-209ENST00000479439.5646No protein-
 
Processed transcript
---TSL:5
ELOVL1-208ENST00000478481.5564No protein-
 
Processed transcript
---TSL:2
ELOVL1-210ENST00000479686.5417No protein-
 
Processed transcript
---TSL:3
Description

diacylglycerol kinase zeta [Source:MGI Symbol;Acc:MGI:1278339]

Gene Synonyms

E130307B02Rik, mDGK[z]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Dgkz-203ENSMUST00000111303.241691123aaENSMUSP00000106934.2
 
Protein coding
CCDS50643A2AHK0 GENCODE basicTSL:1
Dgkz-201ENSMUST00000028667.103584929aaENSMUSP00000028667.4
 
Protein coding
CCDS16441Q80UP3 GENCODE basicAPPRIS P2TSL:1
Dgkz-202ENSMUST00000099709.103512946aaENSMUSP00000106937.3
 
Protein coding
-A2AHJ7 GENCODE basicTSL:5
Dgkz-214ENSMUST00000239257.23393934aaENSMUSP00000159231.2
 
Protein coding
-A0A668KL90 GENCODE basicAPPRIS ALT1
Dgkz-206ENSMUST00000128152.83512134aaENSMUSP00000118684.2
 
Nonsense mediated decay
-D6RHK9 TSL:5
Dgkz-212ENSMUST00000142231.8310981aaENSMUSP00000114740.2
 
Nonsense mediated decay
-D6RDR3 TSL:1
Dgkz-211ENSMUST00000142090.878894aaENSMUSP00000119615.2
 
Nonsense mediated decay
-D6RIP2 TSL:5
Dgkz-204ENSMUST00000124427.2729No protein-
 
Processed transcript
--TSL:3
Dgkz-205ENSMUST00000126473.2412No protein-
 
Processed transcript
--TSL:3
Dgkz-208ENSMUST00000130023.2994No protein-
 
Retained intron
--TSL:2
Dgkz-210ENSMUST00000138894.2905No protein-
 
Retained intron
--TSL:3
Dgkz-207ENSMUST00000128902.8802No protein-
 
Retained intron
--TSL:2
Dgkz-213ENSMUST00000148297.2551No protein-
 
Retained intron
--TSL:2
Dgkz-209ENSMUST00000134103.2480No protein-
 
Retained intron
--TSL:2
Description

ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]

Gene Synonyms

ABC36, HHF1, HI, HRINS, MRP8, PHHI, SUR, SUR1, TNDM2

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ABCC8-202ENST00000389817.849211581aaENSP00000374467.4
 
Protein coding
CCDS31437Q09428-1 NM_000352.6MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
ABCC8-237ENST00000644772.153361603aaENSP00000494321.1
 
Protein coding
CCDS86183A0A2R8Y4V0 -GENCODE basic
ABCC8-201ENST00000302539.949241582aaENSP00000303960.4
 
Protein coding
CCDS73264Q09428-2 -GENCODE basicAPPRIS ALT1TSL:5
ABCC8-226ENST00000643260.149031581aaENSP00000494450.1
 
Protein coding
CCDS86185A0A2R8Y5D8 -GENCODE basicAPPRIS ALT1
ABCC8-222ENST00000642271.148661580aaENSP00000493749.1
 
Protein coding
CCDS86184A0A2R8YDG0 -GENCODE basicAPPRIS ALT1
ABCC8-249ENST00000646902.148741570aaENSP00000494101.1
 
Protein coding
-A0A2R8Y4Z4 -GENCODE basic
ABCC8-273ENST00000683136.148191542aaENSP00000507768.1
 
Protein coding
---GENCODE basic
ABCC8-297ENST00000684571.147221528aaENSP00000506935.1
 
Protein coding
---GENCODE basic
ABCC8-252ENST00000647015.146421498aaENSP00000495389.1
 
Protein coding
-A0A2R8Y6Q0 -GENCODE basic
ABCC8-223ENST00000642579.12893933aaENSP00000496714.1
 
Protein coding
-A0A2R8YHG6 -CDS 5' incomplete
ABCC8-211ENST00000528374.21443445aaENSP00000433638.2
 
Protein coding
-H0YDH8 -TSL:5CDS 5' incomplete
ABCC8-234ENST00000644649.11248416aaENSP00000494519.1
 
Protein coding
-A0A2R8YDE9 -CDS 5' and 3' incomplete
ABCC8-253ENST00000647086.16565693aaENSP00000493677.1
 
Nonsense mediated decay
-A0A2R8YD94 --
ABCC8-232ENST00000644484.15969557aaENSP00000493558.1
 
Nonsense mediated decay
-A0A2R8YCG4 --
ABCC8-246ENST00000646276.15799553aaENSP00000496070.1
 
Nonsense mediated decay
-A0A2R8Y781 --
ABCC8-227ENST00000643562.15445671aaENSP00000496124.1
 
Nonsense mediated decay
-A0A2R8Y7I1 --
ABCC8-241ENST00000645744.15398338aaENSP00000494564.1
 
Nonsense mediated decay
-A0A2R8Y5I7 --
ABCC8-242ENST00000645760.15231619aaENSP00000496309.1
 
Nonsense mediated decay
-A0A2R8YFB3 -CDS 5' incomplete
ABCC8-245ENST00000646207.15128490aaENSP00000495025.1
 
Nonsense mediated decay
-A0A2R8YDX3 --
ABCC8-243ENST00000645884.15094980aaENSP00000495516.1
 
Nonsense mediated decay
-A0A2R8YEE5 --
ABCC8-236ENST00000644757.15025561aaENSP00000495085.1
 
Nonsense mediated decay
-A0A2R8Y5V4 --
ABCC8-250ENST00000646993.15016558aaENSP00000493720.1
 
Nonsense mediated decay
-A0A2R8Y475 --
ABCC8-264ENST00000682288.15014557aaENSP00000507506.1
 
Nonsense mediated decay
----
ABCC8-278ENST00000683456.14998980aaENSP00000508318.1
 
Nonsense mediated decay
----
ABCC8-300ENST00000684711.14979557aaENSP00000506841.1
 
Nonsense mediated decay
----
ABCC8-290ENST00000684288.14951620aaENSP00000507143.1
 
Nonsense mediated decay
----
ABCC8-235ENST00000644675.14940619aaENSP00000494567.1
 
Nonsense mediated decay
-A0A2R8YDG6 --
ABCC8-281ENST00000683562.14863620aaENSP00000508265.1
 
Nonsense mediated decay
----
ABCC8-296ENST00000684555.14797558aaENSP00000507705.1
 
Nonsense mediated decay
----
ABCC8-259ENST00000682140.147751359aaENSP00000507829.1
 
Nonsense mediated decay
----
ABCC8-298ENST00000684593.1477450aaENSP00000507005.1
 
Nonsense mediated decay
----
ABCC8-254ENST00000647158.14761570aaENSP00000495744.1
 
Nonsense mediated decay
-A0A2R8Y6I7 --
ABCC8-262ENST00000682204.14760570aaENSP00000507094.1
 
Nonsense mediated decay
----
ABCC8-270ENST00000682965.147481138aaENSP00000508229.1
 
Nonsense mediated decay
----
ABCC8-283ENST00000683725.147471476aaENSP00000507496.1
 
Nonsense mediated decay
----
ABCC8-244ENST00000646003.14628570aaENSP00000495259.1
 
Nonsense mediated decay
-A0A2R8Y6I7 --
ABCC8-225ENST00000642902.14592565aaENSP00000493601.1
 
Nonsense mediated decay
-A0A2R8Y3M7 -CDS 5' incomplete
ABCC8-251ENST00000647013.14530524aaENSP00000496741.1
 
Nonsense mediated decay
-A0A2R8YFU3 -CDS 5' incomplete
ABCC8-209ENST00000527905.54283997aaENSP00000431653.1
 
Nonsense mediated decay
-E9PK50 -TSL:5
ABCC8-247ENST00000646592.14149298aaENSP00000494407.1
 
Nonsense mediated decay
-A0A2R8YDB5 -CDS 5' incomplete
ABCC8-239ENST00000645076.13885726aaENSP00000494791.1
 
Nonsense mediated decay
-A0A2R8Y5X1 -CDS 5' incomplete
ABCC8-233ENST00000644542.1352550aaENSP00000495532.1
 
Nonsense mediated decay
-Q09428-3 --
ABCC8-228ENST00000643925.13379149aaENSP00000495697.1
 
Nonsense mediated decay
-A0A2R8YG67 -CDS 5' incomplete
ABCC8-231ENST00000644472.12580445aaENSP00000495378.1
 
Nonsense mediated decay
-A0A2R8Y698 --
ABCC8-248ENST00000646737.12556229aaENSP00000494874.1
 
Nonsense mediated decay
-A0A2R8Y605 --
ABCC8-230ENST00000644447.12477680aaENSP00000496282.1
 
Nonsense mediated decay
-A0A2R8YGQ6 -CDS 5' incomplete
ABCC8-240ENST00000645417.11849281aaENSP00000495891.1
 
Nonsense mediated decay
-A0A2R8Y775 -CDS 5' incomplete
ABCC8-219ENST00000532728.61678470aaENSP00000495427.1
 
Nonsense mediated decay
-A0A2R8Y6B7 -TSL:5CDS 5' incomplete
ABCC8-215ENST00000531642.588362aaENSP00000435378.1
 
Nonsense mediated decay
-H0YEA9 -TSL:3CDS 5' incomplete
ABCC8-207ENST00000526168.553733aaENSP00000437233.1
 
Nonsense mediated decay
-H0YF51 -TSL:2CDS 5' incomplete
ABCC8-216ENST00000531891.144053aaENSP00000434893.1
 
Nonsense mediated decay
-H0YE33 -TSL:5CDS 5' incomplete
ABCC8-299ENST00000684614.1562No protein-
 
Processed transcript
----
ABCC8-282ENST00000683693.16528No protein-
 
Retained intron
----
ABCC8-288ENST00000684221.16261No protein-
 
Retained intron
----
ABCC8-224ENST00000642611.26173No protein-
 
Retained intron
----
ABCC8-260ENST00000682185.16145No protein-
 
Retained intron
----
ABCC8-294ENST00000684404.16083No protein-
 
Retained intron
----
ABCC8-287ENST00000684157.16040No protein-
 
Retained intron
----
ABCC8-272ENST00000683093.16005No protein-
 
Retained intron
----
ABCC8-268ENST00000682805.15460No protein-
 
Retained intron
----
ABCC8-263ENST00000682215.15422No protein-
 
Retained intron
----
ABCC8-295ENST00000684442.15279No protein-
 
Retained intron
----
ABCC8-265ENST00000682442.15275No protein-
 
Retained intron
----
ABCC8-293ENST00000684371.15161No protein-
 
Retained intron
----
ABCC8-276ENST00000683365.15157No protein-
 
Retained intron
----
ABCC8-266ENST00000682528.15132No protein-
 
Retained intron
----
ABCC8-292ENST00000684332.15128No protein-
 
Retained intron
----
ABCC8-279ENST00000683522.15107No protein-
 
Retained intron
----
ABCC8-274ENST00000683153.15097No protein-
 
Retained intron
----
ABCC8-258ENST00000682110.15055No protein-
 
Retained intron
----
ABCC8-285ENST00000684010.15050No protein-
 
Retained intron
----
ABCC8-255ENST00000682051.15002No protein-
 
Retained intron
----
ABCC8-267ENST00000682673.14999No protein-
 
Retained intron
----
ABCC8-289ENST00000684253.14958No protein-
 
Retained intron
----
ABCC8-277ENST00000683377.14921No protein-
 
Retained intron
----
ABCC8-291ENST00000684313.14487No protein-
 
Retained intron
----
ABCC8-203ENST00000524561.24441No protein-
 
Retained intron
---TSL:5
ABCC8-218ENST00000532220.24073No protein-
 
Retained intron
---TSL:5
ABCC8-275ENST00000683253.13433No protein-
 
Retained intron
----
ABCC8-256ENST00000682053.13269No protein-
 
Retained intron
----
ABCC8-212ENST00000529967.63179No protein-
 
Retained intron
---TSL:5
ABCC8-284ENST00000683808.12852No protein-
 
Retained intron
----
ABCC8-257ENST00000682091.12682No protein-
 
Retained intron
----
ABCC8-261ENST00000682199.12543No protein-
 
Retained intron
----
ABCC8-238ENST00000645004.22257No protein-
 
Retained intron
----
ABCC8-210ENST00000528202.62173No protein-
 
Retained intron
---TSL:3
ABCC8-280ENST00000683531.12113No protein-
 
Retained intron
----
ABCC8-221ENST00000635881.12011No protein-
 
Retained intron
---TSL:2
ABCC8-205ENST00000526002.21985No protein-
 
Retained intron
---TSL:2
ABCC8-269ENST00000682863.11813No protein-
 
Retained intron
----
ABCC8-229ENST00000644057.21334No protein-
 
Retained intron
----
ABCC8-208ENST00000526921.5958No protein-
 
Retained intron
---TSL:3
ABCC8-286ENST00000684014.1945No protein-
 
Retained intron
----
ABCC8-206ENST00000526037.6775No protein-
 
Retained intron
---TSL:3
ABCC8-217ENST00000531911.1727No protein-
 
Retained intron
---TSL:5
ABCC8-204ENST00000525022.1675No protein-
 
Retained intron
---TSL:5
ABCC8-214ENST00000531137.1665No protein-
 
Retained intron
---TSL:3
ABCC8-213ENST00000530147.5547No protein-
 
Retained intron
---TSL:3
ABCC8-271ENST00000683066.1532No protein-
 
Retained intron
----
ABCC8-220ENST00000612903.2439No protein-
 
Retained intron
---TSL:1
Statistics

Exons: 11, Coding exons: 0, Transcript length: 2,543 bps,

Version

ENST00000682199.1

Type

Retained intron

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x35922fd8)