Human (GRCh38.p14)
Description

GC-rich sequence DNA-binding factor 2 [Source:HGNC Symbol;Acc:HGNC:1317]

Gene Synonyms

C2ORF3, DNABF, GCF, TCF9

Location
About this transcript

This transcript has 3 exons, is associated with 5770 variant alleles and maps to 120 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000321027.8GCFC2-2014367781aaENSP00000318690.3
 
Protein coding
CCDS1961P16383-1 NM_003203.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000541687.5GCFC2-2114318254aaENSP00000437767.1
 
Protein coding
P16383-4 -GENCODE basicTSL:2
ENST00000409857.7GCFC2-2022516743aaENSP00000386552.3
 
Protein coding
CCDS92788P16383-2 -GENCODE basicTSL:5
ENST00000470503.1GCFC2-2071066215aaENSP00000474481.1
 
Protein coding
CCDS62943P16383-3 -GENCODE basicTSL:1
ENST00000442309.5GCFC2-204642185aaENSP00000415831.1
 
Protein coding
C9JII4 -TSL:5CDS 3' incomplete
ENST00000427862.1GCFC2-203632199aaENSP00000409340.1
 
Protein coding
H7C335 -TSL:3CDS 5' incomplete
ENST00000492826.1GCFC2-21044327aaENSP00000475108.1
 
Protein coding
S4R461 -TSL:3CDS 5' incomplete
ENST00000472230.5GCFC2-208226535aaENSP00000474136.1
 
Nonsense mediated decay
S4R3C1 -TSL:2CDS 5' incomplete
ENST00000470285.1GCFC2-20642343aaENSP00000475130.1
 
Nonsense mediated decay
S4R465 -TSL:5CDS 5' incomplete
ENST00000470197.5GCFC2-2053648No protein-
 
Retained intron
--TSL:1
ENST00000486016.1GCFC2-209595No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 3, Coding exons: 2, Transcript length: 423 bps, Translation length: 43 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENST00000470285.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.