Human (GRCh38.p14)
Description

DNA ligase 3 [Source:HGNC Symbol;Acc:HGNC:6600]

Gene Synonyms

LIG2, LIG3ALPHA

Location
About this transcript

This transcript has 6 exons, is associated with 3449 variant alleles and maps to 706 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000378526.9LIG3-20283821009aaENSP00000367787.3
 
Protein coding
CCDS11284P49916-1 NM_013975.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000262327.9LIG3-2013055949aaENSP00000262327.4
 
Protein coding
CCDS11285P49916-2 -GENCODE basicTSL:1
ENST00000585941.5LIG3-2051699545aaENSP00000468479.1
 
Protein coding
K7ERZ5 -TSL:1CDS 3' incomplete
ENST00000585740.5LIG3-204887185aaENSP00000467757.1
 
Protein coding
K7EQB6 -TSL:3CDS 3' incomplete
ENST00000592690.1LIG3-215722207aaENSP00000467063.1
 
Protein coding
K7ENR9 -TSL:2CDS 3' incomplete
ENST00000588109.5LIG3-21059238aaENSP00000466278.1
 
Nonsense mediated decay
K7ELY6 -TSL:4CDS 5' incomplete
ENST00000585370.1LIG3-20323536aaENSP00000465288.1
 
Nonsense mediated decay
K7EJR4 -TSL:3CDS 5' incomplete
ENST00000586407.1LIG3-208815No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000593099.5LIG3-2164664No protein-
 
Retained intron
--TSL:2
ENST00000590181.5LIG3-2121156No protein-
 
Retained intron
--TSL:1
ENST00000590630.5LIG3-213904No protein-
 
Retained intron
--TSL:5
ENST00000586435.1LIG3-209588No protein-
 
Retained intron
--TSL:5
ENST00000586058.1LIG3-206581No protein-
 
Retained intron
--TSL:2
ENST00000586119.1LIG3-207565No protein-
 
Retained intron
--TSL:3
ENST00000588713.1LIG3-211467No protein-
 
Retained intron
--TSL:2
ENST00000592244.1LIG3-214440No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 6, Coding exons: 0, Transcript length: 4,664 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000593099.5

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

retained intron CDS [Definitions]