Human (GRCh38.p14)
Description

UPF1 RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]

Gene Synonyms

HUPF1, KIAA0221, NORF1, PNORF1, RENT1, SMG-2

Location
About this transcript

This transcript has 5 exons, is associated with 3232 variant alleles and maps to 355 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000262803.10UPF1-20153211118aaENSP00000262803.5
 
Protein coding
CCDS12386Q92900-2 NM_002911.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000599848.5UPF1-20753111129aaENSP00000470142.1
 
Protein coding
CCDS74315Q92900-1 -GENCODE basicTSL:1
ENST00000704676.1UPF1-21453061113aaENSP00000515988.1
 
Protein coding
A0A994J4L7 -GENCODE basic
ENST00000704677.1UPF1-2155328391aaENSP00000515989.1
 
Nonsense mediated decay
A0A994J773 --
ENST00000704678.1UPF1-2162055346aaENSP00000515990.1
 
Nonsense mediated decay
A0A994J597 --
ENST00000601981.6UPF1-2134990No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000704679.1UPF1-2174634No protein-
 
Protein coding CDS not defined
---
ENST00000600310.5UPF1-209750No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000598471.1UPF1-206582No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000600868.5UPF1-211580No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000598209.5UPF1-205551No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000600012.5UPF1-208501No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000596842.5UPF1-2043825No protein-
 
Retained intron
--TSL:2
ENST00000594504.6UPF1-2033270No protein-
 
Retained intron
--TSL:3
ENST00000600689.1UPF1-2103084No protein-
 
Retained intron
--TSL:2
ENST00000594243.1UPF1-202683No protein-
 
Retained intron
--TSL:3
ENST00000601689.1UPF1-212561No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 5, Coding exons: 0, Transcript length: 3,084 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000600689.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.