Description
Rab geranylgeranyltransferase subunit alpha [Source:HGNC Symbol;Acc:HGNC:9795]
Gene Synonyms
PTAR3
Location
Scaffold HG1_PATCH: 566,534-572,527 reverse strand.
About this transcript
This transcript has 17 exons, is associated with 4345 variant alleles and maps to 599 oligo probes.
Gene
This transcript is a product of gene ENSG00000285193.1 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq Match | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000644383.1 | RABGGTA-225 | 2265 | 567aa | ENSP00000494636.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q92696 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000646658.1 | RABGGTA-237 | 2088 | 567aa | ENSP00000496595.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q92696 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000644705.1 | RABGGTA-226 | 1197 | 176aa | ENSP00000495251.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000645472.1 | RABGGTA-232 | 680 | 175aa | ENSP00000494366.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000645404.1 | RABGGTA-231 | 1963 | 424aa | ENSP00000494691.1 | Nonsense mediated decay | - | - | - | |
| ENST00000647538.1 | RABGGTA-242 | 1883 | 424aa | ENSP00000494093.1 | Nonsense mediated decay | - | - | - | |
| ENST00000647077.1 | RABGGTA-240 | 704 | 136aa | ENSP00000493910.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000646798.1 | RABGGTA-239 | 573 | 73aa | ENSP00000493879.1 | Nonsense mediated decay | - | - | - | |
| ENST00000646195.1 | RABGGTA-235 | 889 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | - | |
| ENST00000646794.1 | RABGGTA-238 | 886 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | - | |
| ENST00000642788.1 | RABGGTA-222 | 877 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | - | |
| ENST00000647181.1 | RABGGTA-241 | 753 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | - | |
| ENST00000645830.1 | RABGGTA-233 | 570 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | - | |
| ENST00000645202.1 | RABGGTA-230 | 2060 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000643998.1 | RABGGTA-223 | 1997 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000644940.1 | RABGGTA-227 | 1329 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000645841.1 | RABGGTA-234 | 768 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000645110.1 | RABGGTA-229 | 735 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000644941.1 | RABGGTA-228 | 678 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000644156.1 | RABGGTA-224 | 648 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000646336.1 | RABGGTA-236 | 534 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |