Transcript: ENST00000646850.1 PSME1-219

Description

proteasome activator subunit 1 [Source:HGNC Symbol;Acc:HGNC:9568]

Gene Synonyms

IFI5111, PA28ALPHA

Location

Scaffold HG1_PATCH: 437,175-439,765 forward strand.

About this transcript

This transcript has 10 exons, is associated with 1837 variant alleles and maps to 519 oligo probes.

Gene

This transcript is a product of gene ENSG00000284916.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000646132.1	PSME1-218	1136	250aa	ENSP00000496083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06323-2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000645332.1	PSME1-215	1033	90aa	ENSP00000495602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000645537.2	PSME1-217	965	249aa	ENSP00000495095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06323-1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000643169.1	PSME1-212	945	233aa	ENSP00000493882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06323-3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000642736.1	PSME1-211	651	114aa	ENSP00000494432.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000645019.1	PSME1-214	476	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000644115.1	PSME1-213	947	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000645347.1	PSME1-216	922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000646850.1	PSME1-219	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000647451.1	PSME1-220	763	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 865 bps,

Version

ENST00000646850.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000646850.1 PSME1-219

Summary

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Transcript: ENST00000646850.1 PSME1-219

Summary

About Us

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