Transcript: ENSDART00000171019.2 appa-205

Description

amyloid beta (A4) precursor protein a [Source:ZFIN;Acc:ZDB-GENE-000616-13]

Gene Synonyms

app, im:7044540, wu:fj08a12, wu:fj34d10, wu:fk65e12, zgc:85740

Location

Chromosome 1: 626,550-633,356 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 1 variant allele and maps to 102 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000104279.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167331.2	appa-203	4339	194aa	ENSDARP00000130555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IAB7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000166786.2	appa-202	2217	738aa	ENSDARP00000136859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IN41	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170483.2	appa-204	2049	682aa	ENSDARP00000141303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IZ16	-
ENSDART00000171019.2	appa-205	620	207aa	ENSDARP00000136061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IM64	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000161223.2	appa-201	768	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000172116.2	appa-206	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 620 bps, Translation length: 207 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000171019.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000171019.2 appa-205

Summary

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Transcript: ENSDART00000171019.2 appa-205

Summary

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