Transcript: ENSDART00000171837.2 tbce-203

Description

tubulin folding cofactor E [Source:NCBI gene;Acc:664760]

Gene Synonyms

zgc:123075

Location

Chromosome 11: 44,606,545-44,622,478 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 22 domains and features, is associated with 12 variant alleles and maps to 224 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099921.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171837.2	tbce-203	2616	521aa	ENSDARP00000132970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U378	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160639.3	tbce-201	3175	521aa	ENSDARP00000131097.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U378	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173340.2	tbce-207	833	264aa	ENSDARP00000142457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGS8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172258.2	tbce-204	806	239aa	ENSDARP00000138413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ISC6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173366.2	tbce-208	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000171471.2	tbce-202	896	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000173224.2	tbce-206	874	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000172932.2	tbce-205	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,616 bps, Translation length: 521 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5U378

Version

ENSDART00000171837.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000171837.2 tbce-203

Summary

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Transcript: ENSDART00000171837.2 tbce-203

Summary

About Us

Get help

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