Transcript: ENSDART00000171156.2 akap8l-207

Description

A kinase (PRKA) anchor protein 8-like [Source:ZFIN;Acc:ZDB-GENE-040426-2303]

Gene Synonyms

fc52f04, fe38d08, fm58f09, wu:fc52f04, wu:fe38d08, wu:fm58f09, zgc:85966

Location

Chromosome 1: 59,226,133-59,237,085 reverse strand.

About this transcript

This transcript has 8 exons, is associated with 537 variant alleles and maps to 23 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099635.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162466.2	akap8l-201	2351	645aa	ENSDARP00000140942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UKW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168656.2	akap8l-204	1548	493aa	ENSDARP00000134003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QML8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000163257.2	akap8l-202	862	287aa	ENSDARP00000138216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UKS3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000169658.2	akap8l-205	473	158aa	ENSDARP00000137430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEY4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000171156.2	akap8l-207	631	116aa	ENSDARP00000131776.1	Nonsense mediated decay	R4GEN9	-
ENSDART00000170454.2	akap8l-206	488	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000164633.2	akap8l-203	652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 4, Transcript length: 631 bps, Translation length: 116 residues

Version

ENSDART00000171156.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000171156.2 akap8l-207

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000171156.2 akap8l-207

Summary

About Us

Get help

Our sister sites

Follow us