Transcript: ENSDART00000167167.2 utp6-204

Description

UTP6 small subunit processome component [Source:ZFIN;Acc:ZDB-GENE-040426-769]

Gene Synonyms

zgc:55648

Location

Chromosome 6: 18,530,083-18,531,760 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 4 domains and features, is associated with 174 variant alleles and maps to 68 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098433.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169780.2	utp6-205	2014	594aa	ENSDARP00000134857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160693.2	utp6-201	732	226aa	ENSDARP00000141893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXD3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167167.2	utp6-204	622	181aa	ENSDARP00000134361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKF5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000163306.2	utp6-203	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000162148.2	utp6-202	433	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 622 bps, Translation length: 181 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000167167.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000167167.2 utp6-204

Summary

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Transcript: ENSDART00000167167.2 utp6-204

Summary

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