Transcript: ENSDART00000150729.2 tdo2a-205

Description

tryptophan 2,3-dioxygenase a [Source:NCBI gene;Acc:100008541]

Gene Synonyms

fb62b10, tdo2, wu:fb62b10

Location

Chromosome 14: 36,749,257-36,750,327 forward strand.

About this transcript

This transcript has 3 exons, is associated with 239 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000071429.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105590.6	tdo2a-201	1552	406aa	ENSDARP00000096367.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7MBU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150564.3	tdo2a-204	892	56aa	ENSDARP00000125470.1	Nonsense mediated decay	H0WF39	-
ENSDART00000150454.3	tdo2a-202	747	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000150731.2	tdo2a-206	1442	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150458.3	tdo2a-203	965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150729.2	tdo2a-205	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 720 bps,

Version

ENSDART00000150729.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000150729.2 tdo2a-205

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Transcript: ENSDART00000150729.2 tdo2a-205

Summary

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