Transcript: ENSDART00000105590.6 tdo2a-201

Description

tryptophan 2,3-dioxygenase a [Source:NCBI gene;Acc:100008541]

Gene Synonyms

fb62b10, tdo2, wu:fb62b10

Location

Chromosome 14: 36,738,069-36,750,593 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 560 variant alleles and maps to 145 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000071429.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105590.6	tdo2a-201	1552	406aa	ENSDARP00000096367.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7MBU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150564.3	tdo2a-204	892	56aa	ENSDARP00000125470.1	Nonsense mediated decay	H0WF39	-
ENSDART00000150454.3	tdo2a-202	747	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000150731.2	tdo2a-206	1442	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150458.3	tdo2a-203	965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150729.2	tdo2a-205	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,552 bps, Translation length: 406 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A7MBU6

Version

ENSDART00000105590.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000105590.6 tdo2a-201

Summary

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Transcript: ENSDART00000105590.6 tdo2a-201

Summary

About Us

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