Transcript: ENSDART00000152750.2 pcgf5b-203

Description

polycomb group ring finger 5b [Source:NCBI gene;Acc:692252]

Gene Synonyms

zgc:136815

Location

About this transcript

This transcript has 5 exons, is associated with 290 variant alleles and maps to 46 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000086211.7	pcgf5b-201	4109	232aa	ENSDARP00000080646.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1JPS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152750.2	pcgf5b-203	714	75aa	ENSDARP00000127000.1	Nonsense mediated decay	R4GET7	-
ENSDART00000152819.3	pcgf5b-204	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000152271.2	pcgf5b-202	453	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 714 bps, Translation length: 75 residues

Version

ENSDART00000152750.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.