Transcript: ENSDART00000140009.3 slc37a4a-203

Description

solute carrier family 37 member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2230]

Gene Synonyms

fc25d06, slc37a4, wu:fc25d06, zgc:77098

Location

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 343 variant alleles and maps to 243 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055554.6	slc37a4a-201	1927	429aa	ENSDARP00000055553.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0A9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140009.3	slc37a4a-203	783	189aa	ENSDARP00000112960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCU6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133588.2	slc37a4a-202	317	44aa	ENSDARP00000114352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QB84	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142627.2	slc37a4a-204	773	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 783 bps, Translation length: 189 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000140009.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.