Zebrafish (GRCz11)
Description

paired box 2a [Source:NCBI gene;Acc:30425]

Gene Synonyms

Pax-2, cb378, no isthmus, noi, pax-b, pax2.1, pax2a1, pax[zf-b], paxb

Location
About this transcript

This transcript has 11 exons, is annotated with 20 domains and features, is associated with 220 variant alleles and maps to 211 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeUniProt MatchFlags
ENSDART00000076998.6pax2a-2023050391aaENSDARP00000071466.4
 
Protein coding
Q90268 Ensembl CanonicalAPPRIS ALT2
ENSDART00000160921.2pax2a-2124267417aaENSDARP00000131368.2
 
Protein coding
A0A0R4IAI2 APPRIS P5
ENSDART00000160944.2pax2a-2134246410aaENSDARP00000134011.2
 
Protein coding
F1QKT4 APPRIS ALT2
ENSDART00000076992.6pax2a-2014201395aaENSDARP00000071460.5
 
Protein coding
F1QKT4 Q90268 APPRIS ALT2
ENSDART00000134330.3pax2a-2061221406aaENSDARP00000113404.1
 
Protein coding
B8JJS4 APPRIS ALT2
ENSDART00000138332.3pax2a-2081202400aaENSDARP00000112529.1
 
Protein coding
B8JJS3 CDS 3' incomplete
ENSDART00000139782.3pax2a-2091190396aaENSDARP00000123540.1
 
Protein coding
F1QEK2 CDS 5' incomplete
ENSDART00000141310.3pax2a-2101171390aaENSDARP00000119623.1
 
Protein coding
F1R6E2 APPRIS ALT2CDS 5' and 3' incomplete
ENSDART00000132004.2pax2a-2031148292aaENSDARP00000121955.1
 
Protein coding
F1R5S6 CDS 5' incomplete
ENSDART00000144443.3pax2a-2111145381aaENSDARP00000115771.1
 
Protein coding
F1Q6N9 CDS 5' incomplete
ENSDART00000133796.3pax2a-2051126375aaENSDARP00000123397.1
 
Protein coding
F1QHP2 APPRIS ALT2CDS 5' and 3' incomplete
ENSDART00000134424.3pax2a-207879292aaENSDARP00000121417.1
 
Protein coding
Q90268 APPRIS ALT2
ENSDART00000132064.2pax2a-204323No protein-
 
Processed transcript
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Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,202 bps, Translation length: 400 residues

Incomplete CDS

CDS 3' incomplete

Version

ENSDART00000138332.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.