Transcript: ENSDART00000166540.2 kcnip3b-205

Description

Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]

Gene Synonyms

csen, im:7145308, kcnip3, zgc:73306

Location

Chromosome 10: 20,653,716-20,706,270 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 25 domains and features, is associated with 1628 variant alleles and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000017880.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166540.2	kcnip3b-205	2337	259aa	ENSDARP00000130174.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IBJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000124751.4	kcnip3b-202	1158	259aa	ENSDARP00000106407.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBP8	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000064581.7	kcnip3b-201	780	259aa	ENSDARP00000064580.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FDK3	-
ENSDART00000131361.2	kcnip3b-203	748	156aa	ENSDARP00000119344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QF94	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137322.2	kcnip3b-204	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,337 bps, Translation length: 259 residues

Version

ENSDART00000166540.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000166540.2 kcnip3b-205

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Transcript: ENSDART00000166540.2 kcnip3b-205

Summary

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