Zebrafish (GRCz11)
Description

RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]

Gene Synonyms

rbm39, rnpc2, zgc:55780

Location
About this transcript

This transcript has 18 exons, is associated with 162 variant alleles and maps to 336 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeUniProt MatchFlags
ENSDART00000017973.7rbm39a-2012366523aaENSDARP00000022349.4
 
Protein coding
Q803H1 Ensembl CanonicalAPPRIS P5
ENSDART00000186418.1rbm39a-2135601508aaENSDARP00000150420.1
 
Protein coding
A0A2R8QAM8 APPRIS ALT2
ENSDART00000135435.3rbm39a-2052280523aaENSDARP00000116290.1
 
Protein coding
Q803H1 APPRIS P5
ENSDART00000188719.1rbm39a-2141604523aaENSDARP00000149958.1
 
Protein coding
Q803H1 APPRIS P5
ENSDART00000133679.3rbm39a-203790203aaENSDARP00000115129.1
 
Protein coding
E9QHD4 CDS 3' incomplete
ENSDART00000131365.2rbm39a-20254638aaENSDARP00000123547.1
 
Protein coding
E9QBR2 -
ENSDART00000138314.4rbm39a-209259141aaENSDARP00000113124.2
 
Nonsense mediated decay
E9QGY4 -
ENSDART00000139298.3rbm39a-2102848No protein-
 
Processed transcript
--
ENSDART00000148153.3rbm39a-2121818No protein-
 
Processed transcript
--
ENSDART00000135970.3rbm39a-206817No protein-
 
Processed transcript
--
ENSDART00000137251.2rbm39a-208843No protein-
 
Retained intron
--
ENSDART00000134009.2rbm39a-204826No protein-
 
Retained intron
--
ENSDART00000136735.2rbm39a-207769No protein-
 
Retained intron
--
ENSDART00000147746.3rbm39a-211720No protein-
 
Retained intron
--
Statistics

Exons: 18, Coding exons: 3, Transcript length: 2,591 bps, Translation length: 41 residues

Version

ENSDART00000138314.4

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.