Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: csnk1g1 ENSDARG00000104342

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Description

casein kinase 1, gamma 1 [Source:NCBI gene;Acc:494092]

Gene Synonyms

zgc:101563

Location

Chromosome 7: 54,100,664-54,217,630 reverse strand.

GRCz11:CM002891.2

About this gene

This gene has 5 transcripts (splice variants), 291 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162777.2	csnk1g1-203	1654	421aa	ENSDARP00000138782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PRD4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000188268.1	csnk1g1-205	6676	485aa	ENSDARP00000146967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q753	-
ENSDART00000165875.3	csnk1g1-204	6595	458aa	ENSDARP00000140298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IUQ5	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000157420.2	csnk1g1-201	682	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000162177.2	csnk1g1-202	932	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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