Gene: hmgcs1 ENSDARG00000103025

Description

3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1042]

Gene Synonyms

zgc:56481

Location

Chromosome 10: 6,010,570-6,034,397 forward strand.

GRCz11:CM002894.2

About this gene

This gene has 5 transcripts (splice variants), 206 orthologues and is associated with 38 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167613.2	hmgcs1-204	3182	519aa	ENSDARP00000137373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190025.1	hmgcs1-205	1699	519aa	ENSDARP00000145051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQG1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163680.2	hmgcs1-203	986	283aa	ENSDARP00000130729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ34	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000159216.2	hmgcs1-201	688	201aa	ENSDARP00000135052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJE0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000162628.2	hmgcs1-202	643	141aa	ENSDARP00000136183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IME3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Gene: hmgcs1 ENSDARG00000103025

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Gene: hmgcs1 ENSDARG00000103025

Summary

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