Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:dkey-205h13.1 ENSDARG00000079307

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Description

si:dkey-205h13.1 [Source:ZFIN;Acc:ZDB-GENE-090313-227]

Location

Chromosome 23: 26,503,876-26,523,026 reverse strand.

GRCz11:CM002907.2

About this gene

This gene has 7 transcripts (splice variants), 172 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135606.3	si:dkey-205h13.1-204	1396	241aa	ENSDARP00000114490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F188	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122668.3	si:dkey-205h13.1-201	1147	241aa	ENSDARP00000107013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F188	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142417.3	si:dkey-205h13.1-205	824	189aa	ENSDARP00000115415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGG2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143712.2	si:dkey-205h13.1-206	581	22aa	ENSDARP00000117312.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCF7	-
ENSDART00000146646.2	si:dkey-205h13.1-207	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134591.2	si:dkey-205h13.1-203	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000133542.2	si:dkey-205h13.1-202	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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