Gene: llgl2 ENSDARG00000023920

Description

LLGL scribble cell polarity complex component 2 [Source:NCBI gene;Acc:795670]

Gene Synonyms

cb521, lgl2, pen, penner, sb:cb521, wu:fc06g08, wu:fl37c09, zgc:55895

Location

Chromosome 12: 33,734,849-33,789,218 reverse strand.

GRCz11:CM002896.2

About this gene

This gene has 6 transcripts (splice variants), 209 orthologues, 4 paralogues and is associated with 54 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034550.9	llgl2-201	4300	1020aa	ENSDARP00000035593.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZVM2 Q7SZE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000193258.1	llgl2-206	7976	1004aa	ENSDARP00000148623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q3V3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000189849.1	llgl2-205	3252	1020aa	ENSDARP00000148707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZVM2 Q7SZE3	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000127203.4	llgl2-202	950	154aa	ENSDARP00000105110.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1K2W2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000138776.2	llgl2-204	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000132047.2	llgl2-203	503	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: llgl2 ENSDARG00000023920

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Gene: llgl2 ENSDARG00000023920

Summary

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