RRM domain-containing protein [Source:NCBI gene;Acc:173401]
Chromosome II: 163,080-170,627 forward strand.
This transcript has 12 exons, is annotated with 20 domains and features and maps to 70 oligo probes.
This transcript is a product of gene WBGene00001340 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
---|---|---|---|---|---|---|---|
T01D1.2a.3 | - | 2908 | 584aa | T01D1.2a.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EF03 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2a.2 | etr-1-212 | 2762 | 584aa | T01D1.2a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EF03 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2g.1 | etr-1-210 | 2556 | 513aa | T01D1.2g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A7KQE9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2f.1 | - | 2318 | 588aa | T01D1.2f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYS0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2e.3 | - | 2301 | 586aa | T01D1.2e.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYS1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2l.2 | etr-1-217 | 2238 | 589aa | T01D1.2l.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AUP0 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
T01D1.2e.1 | - | 2147 | 586aa | T01D1.2e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYS1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2d.2 | etr-1-218 | 2086 | 535aa | T01D1.2d.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYS3 | - |
T01D1.2f.3 | - | 2062 | 588aa | T01D1.2f.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYS0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2e.2 | - | 2056 | 586aa | T01D1.2e.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYS1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2a.1 | etr-1-211 | 2047 | 584aa | T01D1.2a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EF03 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2l.1 | etr-1-214 | 2044 | 589aa | T01D1.2l.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AUP0 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
T01D1.2f.2 | - | 2030 | 588aa | T01D1.2f.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYS0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2a.4 | - | 2018 | 584aa | T01D1.2a.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EF03 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2e.4 | etr-1-215 | 1981 | 586aa | T01D1.2e.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYS1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2d.1 | etr-1-219 | 1844 | 535aa | T01D1.2d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYS3 | - |
T01D1.2g.2 | - | 1840 | 513aa | T01D1.2g.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A7KQE9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2g.3 | etr-1-213 | 1715 | 513aa | T01D1.2g.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A7KQE9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
T01D1.2m.1 | etr-1-222 | 1395 | 464aa | T01D1.2m.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AX05 | - |
T01D1.2n.1 | etr-1-221 | 1389 | 462aa | T01D1.2n.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3ARP1 | - |
T01D1.2p.1 | etr-1-223 | 1269 | 422aa | T01D1.2p.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AR37 | - |
T01D1.2q.1 | etr-1-224 | 1263 | 420aa | T01D1.2q.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AUP5 | - |
T01D1.2o.1 | etr-1-220 | 1170 | 389aa | T01D1.2o.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AU13 | - |
T01D1.2s.1 | etr-1-228 | 1071 | 356aa | T01D1.2s.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3ARP5 | - |
T01D1.2t.1 | etr-1-227 | 1065 | 354aa | T01D1.2t.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AU17 | - |
T01D1.2b.1 | etr-1-229 | 1059 | 352aa | T01D1.2b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8DYR9 | - |
T01D1.2r.1 | etr-1-225 | 1044 | 347aa | T01D1.2r.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AX10 | - |
T01D1.2u.1 | etr-1-226 | 846 | 281aa | T01D1.2u.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AR42 | - |
T01D1.2v.1 | etr-1-230 | 843 | 280aa | T01D1.2v.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AUQ1 | - |
T01D1.2w.1 | etr-1-231 | 837 | 278aa | T01D1.2w.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AX15 | - |
T01D1.2x.1 | etr-1-232 | 618 | 205aa | T01D1.2x.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3ARQ0 | - |
T01D1.2c | etr-1-216 | 2283 | No protein | - | A non-coding gene.ncRNA | - | - |