Transcript: C05G5.2b.1

Description

Uncharacterized protein [Source:NCBI gene;Acc:181568]

Location

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features and maps to 58 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
C05G5.2a.1	-	2189	685aa	C05G5.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q17676	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
C05G5.2b.1	-	2195	596aa	C05G5.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K5ATY5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,195 bps, Translation length: 596 residues

Version

C05G5.2b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase